File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/80/d8c9683d81e90016f098baea7e6aa0/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-i0mwoi9e because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:54:55,671 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:54:56,448 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:54:56,612 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:54:57,441 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:54:57,592 - cnv_pipe.batch.run_model - INFO - Processing cluster 1073 with 200 probes
2026-05-27 18:54:57,953 - cnv_pipe.batch.run_model.cluster1073 - INFO - Child process started for cluster 1073 with 200 probes
2026-05-27 18:55:51,574 - cnv_pipe.batch.run_model.cluster1073 - INFO - Child process finished cluster 1073. Wrote cluster_1073_samples.csv and cluster_1073_params.csv
2026-05-27 18:55:51,575 - cnv_pipe.batch.run_model - INFO - Cluster 1073 finished in 53.98 seconds. Status: SUCCESS