File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/c87db0bb074a4f69d90a24e0b5f54b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-q3es7o0v because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:55:03,120 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:55:04,081 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:55:04,277 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:55:05,341 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:55:05,511 - cnv_pipe.batch.run_model - INFO - Processing cluster 1109 with 146 probes
2026-05-27 18:55:05,962 - cnv_pipe.batch.run_model.cluster1109 - INFO - Child process started for cluster 1109 with 146 probes
2026-05-27 18:55:58,353 - cnv_pipe.batch.run_model.cluster1109 - INFO - Child process finished cluster 1109. Wrote cluster_1109_samples.csv and cluster_1109_params.csv
2026-05-27 18:55:58,354 - cnv_pipe.batch.run_model - INFO - Cluster 1109 finished in 52.84 seconds. Status: SUCCESS