File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/046bfe28c0d152734c775ce7a9a11c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ovg7423p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:54:52,798 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:54:53,596 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:54:53,766 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:54:54,765 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:54:54,919 - cnv_pipe.batch.run_model - INFO - Processing cluster 1055 with 77 probes
2026-05-27 18:54:55,299 - cnv_pipe.batch.run_model.cluster1055 - INFO - Child process started for cluster 1055 with 77 probes
2026-05-27 18:55:22,283 - cnv_pipe.batch.run_model.cluster1055 - INFO - Child process finished cluster 1055. Wrote cluster_1055_samples.csv and cluster_1055_params.csv
2026-05-27 18:55:22,284 - cnv_pipe.batch.run_model - INFO - Cluster 1055 finished in 27.36 seconds. Status: SUCCESS