File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/8fb7e637b0b2d7abdb28d29ceb7550/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5inbo_th because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:54:25,550 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:54:26,496 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:54:26,681 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:54:27,624 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:54:27,813 - cnv_pipe.batch.run_model - INFO - Processing cluster 884 with 185 probes
2026-05-27 18:54:28,240 - cnv_pipe.batch.run_model.cluster884 - INFO - Child process started for cluster 884 with 185 probes
2026-05-27 18:55:32,326 - cnv_pipe.batch.run_model.cluster884 - INFO - Child process finished cluster 884. Wrote cluster_884_samples.csv and cluster_884_params.csv
2026-05-27 18:55:32,327 - cnv_pipe.batch.run_model - INFO - Cluster 884 finished in 64.51 seconds. Status: SUCCESS