[2026-05-27T18:50:05.408645Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T18:50:05.409726Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T18:50:05.409735Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T18:50:05.409740Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T18:50:05.409744Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXSjkRLt'
[2026-05-27T18:50:05.409748Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T18:50:05.409753Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T18:50:05.409757Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T18:50:05.409761Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T18:50:05.409765Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T18:50:05.409769Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T18:50:05.409773Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T18:50:05.409777Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T18:50:05.409781Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T18:50:05.410419Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T18:50:05.410543Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T18:50:05.416230Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T18:50:05.417042Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T18:50:05.417235Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T18:50:05.417500Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T18:50:05.417854Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.418270Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.418360Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.418432Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.418550Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.418617Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.418739Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.418803Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.419106Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.419344Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.419513Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.419691Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.419769Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.419891Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.420164Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.420851Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.420995Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.422655Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.422940Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T18:50:05.423187Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.423449Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.423522Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.423644Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.423714Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.423833Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.423900Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.424018Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.424084Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.424454Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.424686Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.424805Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.424875Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.425010Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.425082Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.425196Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.425263Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.425381Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.425447Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.425565Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.425633Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.425767Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.425956Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.426342Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.426409Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.426516Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.426584Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.426694Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.426758Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.426926Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.426993Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.427101Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.427167Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.427276Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.427464Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.427928Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.428004Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.428115Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.428178Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.428296Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.428364Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.428478Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.428541Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.428650Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.428715Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.428821Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.428904Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.429168Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.429669Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.430254Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.430321Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.430434Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.430501Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.430614Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.430803Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.432632Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.433175Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.433298Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.433367Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.433480Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.433545Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.433660Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.433723Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.433835Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.433897Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.434010Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.434078Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.434276Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.434983Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.435103Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.435168Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.435281Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.435344Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.435453Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.435516Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.435628Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.435688Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.435830Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.435891Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.451019Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.451714Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.451908Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.452032Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.453079Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.453169Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.453347Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.453492Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.453789Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.453841Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.454349Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.454751Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.455048Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T18:50:05.455399Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T18:50:05.455810Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.456834Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.457806Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.458812Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.461245Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-05-27T18:50:05.461713Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.467227Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T18:50:05.469691Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T18:50:05.473290Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-05-27T18:50:05.475458Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-05-27T18:50:05.478744Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-05-27T18:50:05.479038Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-05-27T18:50:05.539252Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-05-27T18:50:05.543090Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.543176Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.543196Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.543995Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.544267Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.544449Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.548856Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-05-27T18:50:05.550259Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T18:50:05.551217Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T18:50:05.659177Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.659270Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.660218Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.660657Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:05.663664Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-05-27T18:50:05.664564Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-05-27T18:50:06.277052Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.278164Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.280960Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T18:50:06.342228Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.343234Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.345980Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T18:50:06.350979Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.351890Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.354277Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-05-27T18:50:06.383748Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.383826Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.384722Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.385192Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.388335Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-05-27T18:50:06.389032Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T18:50:06.401614Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.402532Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.404855Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-05-27T18:50:06.466466Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.467443Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.470040Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T18:50:06.499334Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.500148Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.502775Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T18:50:06.532314Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.533222Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.535726Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T18:50:06.597308Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.598268Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.600828Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T18:50:06.662690Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.663632Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.666403Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T18:50:06.695774Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.696721Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.699334Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-05-27T18:50:06.704510Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.705322Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.708045Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-05-27T18:50:06.713009Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.713798Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.716478Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-05-27T18:50:06.745789Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.746623Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.749569Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-05-27T18:50:06.810819Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.811706Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.814538Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T18:50:06.843770Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.844900Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.845364Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.847446Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.847838Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-05-27T18:50:06.850116Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-05-27T18:50:06.879511Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.880379Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.883055Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-05-27T18:50:06.912621Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.913471Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.915779Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-05-27T18:50:06.977519Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.978446Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-27T18:50:06.980959Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-05-27T18:50:07.010618Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.011510Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.014269Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-05-27T18:50:07.376352Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.377346Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.380128Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-05-27T18:50:07.410963Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.411828Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.414559Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-05-27T18:50:07.476387Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.477333Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.479849Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T18:50:07.509373Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.510223Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:07.513140Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-05-27T18:50:08.025959Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.026858Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.030065Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T18:50:08.241931Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.242016Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.242796Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.243132Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.246712Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-05-27T18:50:08.247274Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T18:50:08.307688Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.308544Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.311417Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T18:50:08.340599Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.341429Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.343975Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-05-27T18:50:08.405509Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.406363Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.409182Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T18:50:08.438443Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.439244Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.441716Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-05-27T18:50:08.603894Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.604800Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.607764Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T18:50:08.637325Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.638211Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.640889Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-05-27T18:50:08.702669Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.703525Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.706164Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-05-27T18:50:08.735540Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.735618Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.736392Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.736638Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.739311Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-05-27T18:50:08.740125Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-05-27T18:50:08.768774Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.768842Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.769565Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.770998Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.771782Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-05-27T18:50:08.774170Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-05-27T18:50:08.803176Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.803955Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.806390Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-05-27T18:50:08.836044Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.836812Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.839055Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-05-27T18:50:08.868731Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.869508Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.872163Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T18:50:08.933831Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.934617Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:08.937257Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-05-27T18:50:09.048993Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.049066Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.049758Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.050061Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.053004Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-05-27T18:50:09.054056Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T18:50:09.114441Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.115202Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.117954Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-05-27T18:50:09.379836Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.380660Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.383877Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-05-27T18:50:09.745633Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.746407Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.749137Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-05-27T18:50:09.778612Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.779439Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.782311Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T18:50:09.843813Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.844591Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.847256Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-05-27T18:50:09.876589Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.877301Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.879851Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-05-27T18:50:09.909270Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.909923Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-27T18:50:09.912538Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-05-27T18:50:10.124582Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.125287Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.127810Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T18:50:10.189281Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.189369Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.190027Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.191762Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.192668Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-05-27T18:50:10.194959Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T18:50:10.195838Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.196430Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.199001Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T18:50:10.228300Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.228963Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.231862Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-05-27T18:50:10.261119Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.261197Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.261810Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.262201Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.265197Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T18:50:10.266187Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T18:50:10.295859Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.295944Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.296579Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.296966Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.299726Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-05-27T18:50:10.300492Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-05-27T18:50:10.329150Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.329820Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.332678Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-05-27T18:50:10.494355Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.494981Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.497922Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T18:50:10.527208Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.527929Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.530522Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T18:50:10.592132Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.592817Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.595405Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T18:50:10.624810Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.625449Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.628258Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-05-27T18:50:10.657570Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.658257Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.660988Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-05-27T18:50:10.690263Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.690883Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.693556Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-05-27T18:50:10.722967Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.723575Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.726182Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-05-27T18:50:10.755594Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.756196Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.758894Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-05-27T18:50:10.788313Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.788924Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.791624Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-05-27T18:50:10.820901Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.821478Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.824145Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-05-27T18:50:10.885755Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.886369Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.889256Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T18:50:10.918650Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.919209Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.921763Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-05-27T18:50:10.952329Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.952410Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.952913Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.953428Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.956193Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T18:50:10.956990Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-05-27T18:50:10.986928Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:10.986987Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.101257Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.101762Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.104509Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-05-27T18:50:11.133770Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.137462Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.137932Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.140442Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T18:50:11.169833Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.334239Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.334721Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.336846Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T18:50:11.398661Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.399153Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.401576Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-05-27T18:50:11.463239Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.727795Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.728284Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.730610Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-05-27T18:50:11.792635Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.906907Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.907371Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-27T18:50:11.909832Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-05-27T18:50:11.939479Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.355303Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.355790Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.358929Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-05-27T18:50:17.387828Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.388077Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.388188Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.388649Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.389073Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.392852Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T18:50:17.394147Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T18:50:17.395230Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T18:50:17.421602Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.421668Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.421691Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.421885Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.422368Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.424827Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T18:50:17.426723Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T18:50:17.454314Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.454375Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.454549Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T18:50:17.456929Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T18:50:17.486599Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T18:50:24.406772Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T18:50:38.529112Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T18:50:38.529112Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] 
[2026-05-27T18:50:38.529112Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T18:50:38.529182Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] 
[2026-05-27T18:50:38.529189Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T18:50:38.529196Z] [nf-beadc8addf0c77b224411f98a8d787c1-97b58-xrxfk] [553_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec