File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2b/3b3c9d9777563a8a9f6dd59431d2f8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rzpjfjpp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 18:54:38,340 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 18:54:39,167 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 18:54:39,342 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 18:54:40,245 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 18:54:40,416 - cnv_pipe.batch.run_model - INFO - Processing cluster 966 with 177 probes
2026-05-27 18:54:40,793 - cnv_pipe.batch.run_model.cluster966 - INFO - Child process started for cluster 966 with 177 probes
2026-05-27 18:55:34,913 - cnv_pipe.batch.run_model.cluster966 - INFO - Child process finished cluster 966. Wrote cluster_966_samples.csv and cluster_966_params.csv
2026-05-27 18:55:34,914 - cnv_pipe.batch.run_model - INFO - Cluster 966 finished in 54.50 seconds. Status: SUCCESS