cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:160000001, elapsed 0.0s, est remaining 0.6s, peak mem 102MB, user 0.1s, sys 0.5s, output queue size 3
progress 10% @chr2:75000001, elapsed 0.1s, est remaining 0.5s, peak mem 102MB, user 0.1s, sys 1.3s, output queue size 16
progress 15% @chr2:234000001, elapsed 0.1s, est remaining 0.5s, peak mem 102MB, user 0.2s, sys 2.2s, output queue size 5
progress 20% @chr3:152000001, elapsed 0.1s, est remaining 0.5s, peak mem 102MB, user 0.2s, sys 3.1s, output queue size 1
progress 25% @chr4:118000001, elapsed 0.1s, est remaining 0.4s, peak mem 102MB, user 0.2s, sys 3.8s, output queue size 7
progress 30% @chr5:85000001, elapsed 0.2s, est remaining 0.4s, peak mem 102MB, user 0.3s, sys 4.6s, output queue size 1
progress 35% @chr6:67000001, elapsed 0.2s, est remaining 0.4s, peak mem 102MB, user 0.3s, sys 5.4s, output queue size 9
progress 40% @chr7:53000001, elapsed 0.2s, est remaining 0.3s, peak mem 102MB, user 0.4s, sys 6.3s, output queue size 2
progress 45% @chr8:41000001, elapsed 0.3s, est remaining 0.3s, peak mem 102MB, user 0.4s, sys 7.1s, output queue size 17
progress 50% @chr9:70000001, elapsed 0.3s, est remaining 0.3s, peak mem 102MB, user 0.4s, sys 7.9s, output queue size 6
progress 55% @chr10:97000001, elapsed 0.3s, est remaining 0.3s, peak mem 102MB, user 0.4s, sys 8.7s, output queue size 1
progress 60% @chr11:123000001, elapsed 0.3s, est remaining 0.2s, peak mem 102MB, user 0.4s, sys 9.6s, output queue size 4
progress 65% @chr13:15000001, elapsed 0.4s, est remaining 0.2s, peak mem 102MB, user 0.5s, sys 10.5s, output queue size 1
progress 70% @chr14:63000001, elapsed 0.4s, est remaining 0.2s, peak mem 102MB, user 0.6s, sys 11.2s, output queue size 11
progress 75% @chr16:10000001, elapsed 0.4s, est remaining 0.1s, peak mem 102MB, user 0.6s, sys 11.9s, output queue size 3
progress 80% @chr18:1, elapsed 0.5s, est remaining 0.1s, peak mem 102MB, user 0.6s, sys 12.8s, output queue size 16
progress 85% @chr20:21000001, elapsed 0.5s, est remaining 0.1s, peak mem 102MB, user 0.7s, sys 13.6s, output queue size 1
progress 90% @chr21:39000001, elapsed 0.5s, est remaining 0.1s, peak mem 126MB, user 1.1s, sys 14.1s, output queue size 114
progress 95% @chrY:29000001, elapsed 0.6s, est remaining 0.0s, peak mem 139MB, user 1.3s, sys 14.8s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.0s, est remaining 0.0s, peak mem 168MB, user 2.5s, sys 16.1s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395349
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 0.936 user 8.355 sys 9.696 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.006 user 0.002 sys 1.020 real
idle: 74 calls 0.004 user 0.023 sys 43.145 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 176234496 mem 2.720 user 16.529 sys 2.179 real