cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo AlignmentStat HCC1395_BL.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo HCC1395_BL.sentieon.insert_size_metrics --algo QualDistribution HCC1395_BL.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle HCC1395_BL.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle HCC1395_BL.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:186000001, elapsed 0.1s, est remaining 1.2s, peak mem 81MB, user 0.1s, sys 1.4s, output queue size 12
progress 10% @chr2:100000001, elapsed 0.1s, est remaining 1.1s, peak mem 81MB, user 0.1s, sys 2.9s, output queue size 7
progress 15% @chr2:224000001, elapsed 0.2s, est remaining 1.0s, peak mem 81MB, user 0.2s, sys 4.9s, output queue size 50
progress 20% @chr3:166000001, elapsed 0.2s, est remaining 1.0s, peak mem 81MB, user 0.3s, sys 6.9s, output queue size 17
progress 25% @chr4:104000001, elapsed 0.3s, est remaining 1.0s, peak mem 81MB, user 0.4s, sys 8.9s, output queue size 12
progress 30% @chr5:93000001, elapsed 0.4s, est remaining 0.9s, peak mem 81MB, user 0.5s, sys 11.0s, output queue size 4
progress 35% @chr6:64000001, elapsed 0.5s, est remaining 0.9s, peak mem 81MB, user 0.6s, sys 13.1s, output queue size 6
progress 40% @chr7:65000001, elapsed 0.5s, est remaining 0.8s, peak mem 81MB, user 0.6s, sys 15.1s, output queue size 10
progress 45% @chr8:65000001, elapsed 0.6s, est remaining 0.7s, peak mem 81MB, user 0.8s, sys 17.2s, output queue size 24
progress 50% @chr9:74000001, elapsed 0.7s, est remaining 0.7s, peak mem 81MB, user 0.9s, sys 19.2s, output queue size 33
progress 55% @chr10:92000001, elapsed 0.7s, est remaining 0.6s, peak mem 81MB, user 1.0s, sys 21.3s, output queue size 10
progress 60% @chr11:118000001, elapsed 0.8s, est remaining 0.5s, peak mem 81MB, user 1.1s, sys 23.1s, output queue size 19
progress 65% @chr13:11000001, elapsed 0.9s, est remaining 0.5s, peak mem 81MB, user 1.2s, sys 25.2s, output queue size 12
progress 70% @chr14:54000001, elapsed 0.9s, est remaining 0.4s, peak mem 81MB, user 1.3s, sys 27.2s, output queue size 7
progress 75% @chr16:6000001, elapsed 1.0s, est remaining 0.3s, peak mem 81MB, user 1.5s, sys 29.3s, output queue size 10
progress 80% @chr18:4000001, elapsed 1.1s, est remaining 0.3s, peak mem 81MB, user 1.6s, sys 31.3s, output queue size 3
progress 85% @chr20:25000001, elapsed 1.2s, est remaining 0.2s, peak mem 81MB, user 1.7s, sys 33.4s, output queue size 1
progress 90% @chrX:38000001, elapsed 1.3s, est remaining 0.1s, peak mem 90MB, user 2.6s, sys 34.5s, output queue size 114
progress 95% @chrY:33000001, elapsed 1.3s, est remaining 0.1s, peak mem 108MB, user 3.5s, sys 36.0s, output queue size 276
progress 100% @chr21:41000001, elapsed 2.2s, est remaining 0.0s, peak mem 126MB, user 6.0s, sys 38.6s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 51395357
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.382 user 20.212 sys 21.540 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.007 user 0.000 sys 2.176 real
idle: 81 calls 0.013 user 0.009 sys 52.190 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 132276224 mem 6.187 user 39.156 sys 3.226 real