mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kmu9sca3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 00:01:51,697 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 00:01:52,604 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 00:01:52,788 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 00:01:53,753 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 00:01:53,965 - cnv_pipe.batch.run_model - INFO - Processing cluster 1078 with 113 probes
2026-05-28 00:01:54,383 - cnv_pipe.batch.run_model.cluster1078 - INFO - Child process started for cluster 1078 with 113 probes
2026-05-28 00:02:35,227 - cnv_pipe.batch.run_model.cluster1078 - INFO - Child process finished cluster 1078. Wrote cluster_1078_samples.csv and cluster_1078_params.csv
2026-05-28 00:02:35,228 - cnv_pipe.batch.run_model - INFO - Cluster 1078 finished in 41.26 seconds. Status: SUCCESS