cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:159000001, elapsed 0.1s, est remaining 1.0s, peak mem 105MB, user 0.1s, sys 1.1s, output queue size 5
progress 10% @chr2:96000001, elapsed 0.1s, est remaining 1.1s, peak mem 105MB, user 0.1s, sys 2.7s, output queue size 41
progress 15% @chr3:13000001, elapsed 0.2s, est remaining 1.1s, peak mem 105MB, user 0.2s, sys 4.8s, output queue size 62
progress 20% @chr3:169000001, elapsed 0.3s, est remaining 1.0s, peak mem 105MB, user 0.3s, sys 6.8s, output queue size 70
progress 25% @chr4:64000001, elapsed 0.3s, est remaining 1.0s, peak mem 105MB, user 0.4s, sys 8.7s, output queue size 64
progress 30% @chr5:38000001, elapsed 0.4s, est remaining 0.9s, peak mem 105MB, user 0.5s, sys 10.6s, output queue size 62
progress 35% @chr6:86000001, elapsed 0.4s, est remaining 0.8s, peak mem 105MB, user 0.6s, sys 12.4s, output queue size 50
progress 40% @chr7:79000001, elapsed 0.5s, est remaining 0.8s, peak mem 105MB, user 0.7s, sys 14.2s, output queue size 63
progress 45% @chr8:5000001, elapsed 0.6s, est remaining 0.7s, peak mem 105MB, user 0.8s, sys 16.1s, output queue size 57
progress 50% @chr9:97000001, elapsed 0.6s, est remaining 0.6s, peak mem 105MB, user 0.9s, sys 18.0s, output queue size 56
progress 55% @chr10:118000001, elapsed 0.7s, est remaining 0.6s, peak mem 105MB, user 1.0s, sys 20.0s, output queue size 52
progress 60% @chr12:10000001, elapsed 0.8s, est remaining 0.5s, peak mem 105MB, user 1.0s, sys 21.8s, output queue size 64
progress 65% @chr13:39000001, elapsed 0.8s, est remaining 0.4s, peak mem 105MB, user 1.1s, sys 23.7s, output queue size 59
progress 70% @chr14:84000001, elapsed 0.9s, est remaining 0.4s, peak mem 105MB, user 1.2s, sys 25.5s, output queue size 78
progress 75% @chr16:31000001, elapsed 1.0s, est remaining 0.3s, peak mem 105MB, user 1.3s, sys 27.7s, output queue size 75
progress 80% @chr17:18000001, elapsed 1.0s, est remaining 0.3s, peak mem 105MB, user 1.4s, sys 29.7s, output queue size 96
progress 85% @chr20:37000001, elapsed 1.1s, est remaining 0.2s, peak mem 105MB, user 1.4s, sys 31.5s, output queue size 79
progress 90% @chrX:41000001, elapsed 1.2s, est remaining 0.1s, peak mem 105MB, user 1.9s, sys 33.0s, output queue size 114
progress 95% @chrY:47000001, elapsed 1.3s, est remaining 0.1s, peak mem 114MB, user 2.2s, sys 34.2s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.9s, est remaining 0.0s, peak mem 144MB, user 4.2s, sys 37.1s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813896
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.325 user 19.647 sys 21.239 real
done: 1 calls 0.000 user 0.010 sys 0.016 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.000 sys 1.878 real
idle: 74 calls 0.005 user 0.030 sys 46.418 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 151150592 mem 4.650 user 37.905 sys 3.485 real