File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/311e83d486c46223e98ae427de3ac5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8a34mk78 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 00:01:28,207 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 00:01:28,993 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 00:01:29,159 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 00:01:30,055 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 00:01:30,207 - cnv_pipe.batch.run_model - INFO - Processing cluster 952 with 197 probes
2026-05-28 00:01:30,578 - cnv_pipe.batch.run_model.cluster952 - INFO - Child process started for cluster 952 with 197 probes
2026-05-28 00:02:28,269 - cnv_pipe.batch.run_model.cluster952 - INFO - Child process finished cluster 952. Wrote cluster_952_samples.csv and cluster_952_params.csv
2026-05-28 00:02:28,270 - cnv_pipe.batch.run_model - INFO - Cluster 952 finished in 58.06 seconds. Status: SUCCESS