File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/94677a92f19093267c3fe57094d2d8/.command.log
Size
1.6 KB
Task
DAQ:SAMTOOLS_MERGE (Sig_18_tissue)
Attempt

Content

View in new tab 
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/94677a92f19093267c3fe57094d2d8/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/595cf1bcc1ca26392e4d55762b65ae/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e5/b15a14c77ebac1c0ac4c8b4c7e8ae9/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/84/2902345980fcbfc44a1e693e508007/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/6552a648802edd9f5c82b78dc281e5/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/f2cdf939f1570ca8f9a78011cd974b/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/94677a92f19093267c3fe57094d2d8/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/3f05ea22f2719c3c2dff4a29dfca1c/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/06c6283292e9e69e79121c9bd1cb93/Sig_18_tissue.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/9520ec9f2f65de4d60cd7e9bea8c04/Sig_18_tissue.bam
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory