File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/c51bb74e2f4076222b2750efeea492/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ejmyn6fl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 00:00:42,363 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 00:00:43,183 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 00:00:43,351 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 00:00:44,244 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 00:00:44,311 - cnv_pipe.batch.run_model - INFO - Processing cluster 727 with 162 probes
2026-05-28 00:00:44,774 - cnv_pipe.batch.run_model.cluster727 - INFO - Child process started for cluster 727 with 162 probes
2026-05-28 00:01:32,788 - cnv_pipe.batch.run_model.cluster727 - INFO - Child process finished cluster 727. Wrote cluster_727_samples.csv and cluster_727_params.csv
2026-05-28 00:01:32,789 - cnv_pipe.batch.run_model - INFO - Cluster 727 finished in 48.48 seconds. Status: SUCCESS