cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_tissue.md.bam --algo AlignmentStat Sig_18_tissue.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo Sig_18_tissue.sentieon.insert_size_metrics --algo QualDistribution Sig_18_tissue.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle Sig_18_tissue.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle Sig_18_tissue.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:166000001, elapsed 0.1s, est remaining 1.1s, peak mem 81MB, user 0.5s, sys 0.1s, output queue size 11
progress 10% @chr2:54000001, elapsed 0.1s, est remaining 0.8s, peak mem 81MB, user 1.2s, sys 0.3s, output queue size 19
progress 15% @chr2:241000001, elapsed 0.1s, est remaining 0.7s, peak mem 81MB, user 1.8s, sys 0.7s, output queue size 5
progress 20% @chr3:163000001, elapsed 0.1s, est remaining 0.6s, peak mem 81MB, user 2.6s, sys 0.7s, output queue size 9
progress 25% @chr4:112000001, elapsed 0.2s, est remaining 0.5s, peak mem 81MB, user 3.4s, sys 0.9s, output queue size 13
progress 30% @chr5:83000001, elapsed 0.2s, est remaining 0.5s, peak mem 81MB, user 4.0s, sys 1.2s, output queue size 5
progress 35% @chr6:60000001, elapsed 0.2s, est remaining 0.4s, peak mem 81MB, user 4.6s, sys 1.5s, output queue size 5
progress 40% @chr7:50000001, elapsed 0.3s, est remaining 0.4s, peak mem 81MB, user 5.4s, sys 1.6s, output queue size 9
progress 45% @chr8:52000001, elapsed 0.3s, est remaining 0.4s, peak mem 81MB, user 6.2s, sys 1.8s, output queue size 16
progress 50% @chr9:64000001, elapsed 0.3s, est remaining 0.3s, peak mem 81MB, user 6.9s, sys 2.0s, output queue size 9
progress 55% @chr10:87000001, elapsed 0.4s, est remaining 0.3s, peak mem 81MB, user 7.1s, sys 2.7s, output queue size 8
progress 60% @chr11:127000001, elapsed 0.4s, est remaining 0.3s, peak mem 81MB, user 7.3s, sys 3.5s, output queue size 9
progress 65% @chr13:25000001, elapsed 0.4s, est remaining 0.2s, peak mem 81MB, user 7.9s, sys 3.8s, output queue size 1
progress 70% @chr14:67000001, elapsed 0.5s, est remaining 0.2s, peak mem 81MB, user 8.6s, sys 4.1s, output queue size 6
progress 75% @chr16:16000001, elapsed 0.5s, est remaining 0.2s, peak mem 81MB, user 9.4s, sys 4.2s, output queue size 18
progress 80% @chr17:82000001, elapsed 0.5s, est remaining 0.1s, peak mem 81MB, user 10.0s, sys 4.5s, output queue size 5
progress 85% @chr20:18000001, elapsed 0.6s, est remaining 0.1s, peak mem 81MB, user 11.0s, sys 4.7s, output queue size 8
progress 90% @chrX:43000001, elapsed 0.6s, est remaining 0.1s, peak mem 105MB, user 11.9s, sys 4.8s, output queue size 114
progress 95% @chrY:46000001, elapsed 0.7s, est remaining 0.0s, peak mem 124MB, user 12.5s, sys 5.0s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.4s, est remaining 0.0s, peak mem 145MB, user 16.1s, sys 5.3s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 50047062
reads: 1001838
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.667 user 2.591 sys 4.256 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.003 user 0.002 sys 1.447 real
idle: 61 calls 0.039 user 0.005 sys 52.117 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 152854528 mem 16.748 user 5.569 sys 2.501 real