[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXLAgrXA/chr4_22420786-22421189.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXLAgrXA/chr4_22420786-22421189.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXLAgrXA/chr4_22420786-22421189.bed.gz.tbi
[2026-05-27T23:55:51.865945Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T23:55:51.876185Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T23:55:51.876223Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T23:55:51.876231Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T23:55:51.876237Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXLAgrXA'
[2026-05-27T23:55:51.876244Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T23:55:51.876252Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T23:55:51.876257Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T23:55:51.876264Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T23:55:51.876269Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T23:55:51.876276Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T23:55:51.876281Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T23:55:51.876288Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T23:55:51.876293Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T23:55:51.876796Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T23:55:51.876922Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T23:55:51.886456Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T23:55:51.887319Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T23:55:51.887600Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T23:55:51.887903Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T23:55:51.888250Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.888948Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.889109Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.889228Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.889454Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.889668Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.890297Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.890529Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.890668Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.891319Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.891749Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.892077Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.892291Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.894903Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.895230Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T23:55:51.895588Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.896044Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.896462Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.896704Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.896830Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.897144Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.897281Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.897661Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.898045Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.898240Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.898340Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.898528Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.898630Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.898800Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.898898Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.899200Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.899722Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.899967Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.900100Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.900365Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.900487Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.900694Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.901020Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.901738Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.901858Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.902100Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.902210Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.902396Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.902506Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.903314Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.903655Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.903920Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.904148Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.904396Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.904515Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.904912Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.905551Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.905768Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.905887Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.906086Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.906198Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.906384Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.906498Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.906918Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.907733Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.907956Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.908065Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.908289Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.908418Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.908608Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.908854Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.909841Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.910041Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.910259Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.910372Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.910563Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.910716Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.911109Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.911995Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.914055Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.915067Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.915291Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.915419Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.915609Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.915713Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.915894Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.915992Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.916231Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.916516Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.917574Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.917698Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.917891Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.918016Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.918198Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.918304Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.918498Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.918730Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.920008Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.920161Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.920394Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.920506Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.943231Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.943997Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.944162Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.945500Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.945782Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.946132Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.946708Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.946816Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.947414Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.947589Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.947905Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.948423Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.949273Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.950011Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.950657Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.951081Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.951510Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.952436Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.953035Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T23:55:51.958366Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T23:55:51.962447Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-05-27T23:55:51.966937Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-05-27T23:55:51.969993Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T23:55:51.972499Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-05-27T23:55:51.975347Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-05-27T23:55:51.976709Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T23:55:51.978368Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-05-27T23:55:52.092025Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:52.093539Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:55:52.097566Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T23:55:52.509413Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:52.511177Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:52.514602Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T23:55:53.227680Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.228768Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.231922Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T23:55:53.343415Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.344672Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.348319Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T23:55:53.560615Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.562130Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.564855Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-05-27T23:55:53.626562Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.628052Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.631721Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-05-27T23:55:53.743279Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.745162Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.748785Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T23:55:54.361496Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.363009Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.366885Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T23:55:54.395786Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.397266Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.401025Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T23:55:54.461886Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.463344Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.467617Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T23:55:54.779659Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.781932Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.785452Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T23:55:54.799646Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.801118Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.804511Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-05-27T23:55:54.833334Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.834677Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.838051Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T23:55:54.999279Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.000871Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.004183Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-05-27T23:55:55.065261Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.066468Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.069764Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T23:55:55.099055Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.100570Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.103224Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-05-27T23:55:55.104460Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.104538Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.105804Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.106107Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.109627Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-05-27T23:55:55.111059Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-05-27T23:55:55.138658Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.140314Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.140646Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.142179Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.145688Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T23:55:55.146869Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T23:55:55.208056Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.208147Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.209461Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.209738Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.213681Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T23:55:55.214562Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T23:55:55.226602Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.227827Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.230597Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T23:55:55.291808Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.293134Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.296530Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-05-27T23:55:55.510336Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.511404Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.514588Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-05-27T23:55:55.577031Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.578370Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.581951Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-05-27T23:55:56.203587Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.204928Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.208129Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-05-27T23:55:56.269796Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.271042Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.272269Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.272549Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.276107Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-05-27T23:55:56.277129Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T23:55:56.337075Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.338391Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.341285Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-05-27T23:55:56.402726Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.403989Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.407610Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-05-27T23:55:56.468596Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.469962Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.473447Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T23:55:56.502261Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.503551Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.506588Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-05-27T23:55:56.536464Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.537651Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.540384Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T23:55:56.802056Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.803403Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.806449Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-05-27T23:55:56.867662Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.868950Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.872823Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-05-27T23:55:56.901725Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.902828Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.906221Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T23:55:57.170913Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.172144Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.175446Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T23:55:57.236270Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.237571Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.241131Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-05-27T23:55:57.301915Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.303150Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.306522Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T23:55:57.367392Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.367509Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.368664Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.369143Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.373142Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-05-27T23:55:58.035676Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.036878Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.040524Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T23:55:58.101299Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.102471Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.106235Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T23:55:58.320290Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.321596Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.325313Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-05-27T23:55:58.386083Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.386210Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.387232Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.387507Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.391256Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-05-27T23:55:58.393070Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-05-27T23:55:58.852865Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.854150Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.857695Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-05-27T23:55:59.320845Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.322464Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.322756Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.324468Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.327955Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T23:55:59.328940Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T23:55:59.488997Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.490196Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.493830Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T23:55:59.554657Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.555750Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.558708Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-05-27T23:55:59.620129Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.620256Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.621211Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.621545Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.625163Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-05-27T23:55:59.626171Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T23:55:59.685847Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.686862Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.692342Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-05-27T23:55:59.751269Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.752251Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.755701Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-05-27T23:55:59.817989Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.819115Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.823541Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-05-27T23:55:59.825687Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-05-27T23:55:59.827892Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.828020Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.828999Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.829340Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.833349Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T23:55:59.834563Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T23:55:59.894022Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.894984Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.898291Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T23:55:59.910910Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.911847Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.915343Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T23:56:00.126537Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.127547Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.132097Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-05-27T23:56:00.193403Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.194625Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.198013Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-05-27T23:56:00.258969Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.259067Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.260095Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.262330Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.263040Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T23:56:00.265289Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-05-27T23:56:00.326850Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.327910Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.331096Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T23:56:00.592642Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.593632Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.597668Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-05-27T23:56:00.658608Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.659581Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.662509Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-05-27T23:56:00.723827Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.724786Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.728623Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T23:56:01.090024Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.090160Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.091089Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.091463Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.094570Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-05-27T23:56:01.095830Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T23:56:01.124766Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.125701Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.127886Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-05-27T23:56:01.141402Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.141472Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.142228Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.142502Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.146027Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-05-27T23:56:01.147117Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T23:56:01.158922Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.159665Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.162320Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-05-27T23:56:01.223510Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.223582Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.224333Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.224770Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.227987Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T23:56:01.229537Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-05-27T23:56:01.289012Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.289096Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.289830Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.290253Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.294506Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-05-27T23:56:01.294743Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T23:56:01.355081Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.355185Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.355881Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.358911Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T23:56:01.470116Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.470204Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.470244Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.470930Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.471208Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.471652Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.474933Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T23:56:01.476443Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T23:56:01.477611Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-05-27T23:56:01.539418Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.539504Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.539547Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.653798Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.653942Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.654773Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.655159Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.657949Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-05-27T23:56:01.659000Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-05-27T23:56:01.720244Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.720343Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.084951Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.085659Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.088881Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T23:56:02.149844Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.516563Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.517218Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.520183Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T23:56:03.548996Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.549394Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.549564Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.549943Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.550550Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.555347Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T23:56:03.556969Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T23:56:03.558230Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T23:56:03.614761Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.614840Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.614867Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.615116Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.615416Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.617954Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T23:56:03.642283Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T23:56:03.647940Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.655374Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.655609Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.657737Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T23:56:03.687403Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:10.906927Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T23:56:24.997870Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T23:56:24.997870Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] 
[2026-05-27T23:56:24.997870Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T23:56:24.997999Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] 
[2026-05-27T23:56:24.998012Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T23:56:24.998023Z] [nf-6ae5bb6665550ef37fc69d7385c13198-319da-v24s7] [662_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec