File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/697862501f3fd1e6ccb3e50f0383c1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-lf6dxuv8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 00:01:33,294 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 00:01:34,067 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 00:01:34,228 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 00:01:35,057 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 00:01:35,195 - cnv_pipe.batch.run_model - INFO - Processing cluster 977 with 181 probes
2026-05-28 00:01:35,564 - cnv_pipe.batch.run_model.cluster977 - INFO - Child process started for cluster 977 with 181 probes
2026-05-28 00:02:27,825 - cnv_pipe.batch.run_model.cluster977 - INFO - Child process finished cluster 977. Wrote cluster_977_samples.csv and cluster_977_params.csv
2026-05-28 00:02:27,826 - cnv_pipe.batch.run_model - INFO - Cluster 977 finished in 52.63 seconds. Status: SUCCESS