File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3a/43764e4f71cb4cbe28c81c9655d0a0/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-otzwp771 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 00:00:55,583 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 00:00:56,514 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 00:00:56,716 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 00:00:57,833 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 00:00:58,111 - cnv_pipe.batch.run_model - INFO - Processing cluster 776 with 198 probes
2026-05-28 00:00:58,610 - cnv_pipe.batch.run_model.cluster776 - INFO - Child process started for cluster 776 with 198 probes
2026-05-28 00:02:22,762 - cnv_pipe.batch.run_model.cluster776 - INFO - Child process finished cluster 776. Wrote cluster_776_samples.csv and cluster_776_params.csv
2026-05-28 00:02:22,764 - cnv_pipe.batch.run_model - INFO - Cluster 776 finished in 84.65 seconds. Status: SUCCESS