File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/ef2c2dbdcca07cd55d0c30be810402/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-wc4s1xsv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 00:01:51,487 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 00:01:52,284 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 00:01:52,452 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 00:01:53,367 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 00:01:53,525 - cnv_pipe.batch.run_model - INFO - Processing cluster 1075 with 122 probes
2026-05-28 00:01:53,910 - cnv_pipe.batch.run_model.cluster1075 - INFO - Child process started for cluster 1075 with 122 probes
2026-05-28 00:02:31,388 - cnv_pipe.batch.run_model.cluster1075 - INFO - Child process finished cluster 1075. Wrote cluster_1075_samples.csv and cluster_1075_params.csv
2026-05-28 00:02:31,389 - cnv_pipe.batch.run_model - INFO - Cluster 1075 finished in 37.86 seconds. Status: SUCCESS