File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/82578071d2b5406be45b8c94098cd9/.command.err
Size
100.8 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_1;chr6_138229684-138229952.bed)
Attempt

Content

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[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXSljq7w/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXSljq7w/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXSljq7w/chr6_138229684-138229952.bed.gz.tbi
[2026-05-27T23:55:50.888066Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T23:55:50.894532Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T23:55:50.894561Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T23:55:50.894573Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T23:55:50.894583Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXSljq7w'
[2026-05-27T23:55:50.894595Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T23:55:50.894606Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T23:55:50.894619Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T23:55:50.894628Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] [RunParameters] memMb: 510518
[2026-05-27T23:55:50.894642Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T23:55:50.894651Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T23:55:50.894663Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T23:55:50.894673Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T23:55:50.894685Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T23:55:50.895137Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T23:55:50.895250Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T23:55:50.905649Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T23:55:50.906435Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T23:55:50.906842Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T23:55:50.907135Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T23:55:50.907593Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.908521Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.908789Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.909099Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.909801Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T23:55:50.910447Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.911166Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.911613Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.913899Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.914297Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T23:55:50.914842Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.915003Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.915245Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.915387Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.915836Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.916366Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.917184Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.917357Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.917638Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.917803Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.918173Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.918690Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.919375Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.919530Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.919762Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.919901Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.920142Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.920309Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.921119Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.921641Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.921887Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.922043Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.922296Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.922438Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.923074Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.923701Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.923945Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.924092Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.924324Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.924461Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.924849Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.925615Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.925869Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.926085Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.926333Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.926486Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.927185Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.928104Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.928387Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.928557Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.928784Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.928936Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.929432Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.930257Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.930522Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.930738Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.930998Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.931146Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.931766Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.932716Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.932975Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.933116Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.933368Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.933527Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.934071Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.935097Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.935345Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.935488Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.935733Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.935874Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.936503Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.937485Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.937764Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.937924Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.940459Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.941539Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.941861Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.942022Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.942270Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.942422Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.943041Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.944248Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.944506Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.944650Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.944891Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.945055Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.945630Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.946872Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.947111Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.947243Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.947467Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.947610Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.947999Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.949402Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.949694Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.949830Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.950068Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.950198Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.950606Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.951960Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.952308Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.952445Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.952669Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.952798Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.953179Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.954774Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.955006Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.955139Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.955366Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.955498Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.960575Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.960885Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:50.961184Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.963542Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:50.963902Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.964474Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T23:55:50.964695Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.968219Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:55:50.978324Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:50.995044Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:50.995909Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.996372Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:50.996858Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.998038Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:50.998791Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T23:55:50.999808Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.002230Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.008871Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T23:55:51.013166Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T23:55:51.016118Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T23:55:51.016735Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T23:55:51.022041Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T23:55:51.024371Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T23:55:51.028745Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.029188Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T23:55:51.031019Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T23:55:51.031826Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.032902Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.034238Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.035609Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T23:55:51.035853Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T23:55:51.151526Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.151613Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.153319Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.154008Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:51.159999Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T23:55:53.172888Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.174671Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.178508Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T23:55:53.289372Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.291253Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.295429Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T23:55:53.307889Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.310050Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.310885Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.315711Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T23:55:53.315926Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.319727Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T23:55:53.430436Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.432218Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.435959Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T23:55:53.747071Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.747186Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.748919Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.749405Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.754049Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-27T23:55:53.758329Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T23:55:53.815010Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.816673Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.820565Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-27T23:55:53.878976Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T23:55:53.881122Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.881202Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.881274Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.883007Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.883385Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.884012Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.888117Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-27T23:55:53.892233Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T23:55:53.894281Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.895997Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.899917Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T23:55:53.927818Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-27T23:55:53.928515Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.930578Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.931218Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.935515Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T23:55:53.935818Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.939262Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T23:55:54.000216Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.001947Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.005700Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T23:55:54.034351Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.036133Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.039983Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-27T23:55:54.100562Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.100676Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.102292Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.102719Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.107314Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-27T23:55:54.108855Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T23:55:54.167521Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.169221Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.173222Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T23:55:54.201815Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.203527Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.207506Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T23:55:55.069357Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.071158Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.074801Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T23:55:55.185699Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.187383Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.191242Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-27T23:55:55.251884Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.253611Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.257586Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T23:55:55.468490Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.470156Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.473835Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-27T23:55:55.534606Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.536324Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.540231Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T23:55:56.101838Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.103394Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.107432Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-27T23:55:56.167818Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.167940Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.167996Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.169636Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.170036Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.170584Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.177989Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T23:55:56.179663Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T23:55:56.787135Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.788704Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.792311Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T23:55:56.903226Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.904858Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.908901Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T23:55:57.069812Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.071491Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.075420Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-27T23:55:57.135744Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.137356Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.140921Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T23:55:57.251766Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.253402Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.257185Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-27T23:55:57.317848Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.319521Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.323111Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T23:55:57.351838Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.353393Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.356829Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T23:55:57.417745Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.419373Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.423147Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-27T23:55:57.451754Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.453308Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.457256Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T23:55:57.461661Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.463125Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.466508Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T23:55:58.078400Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.079955Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.083338Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-27T23:55:58.144255Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.145857Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.149345Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-27T23:55:58.210204Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.211752Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.215448Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T23:55:58.340258Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T23:55:58.376547Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.378112Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.381964Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-27T23:55:58.442656Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.442767Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.444214Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.444636Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.448880Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-27T23:55:58.450173Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T23:55:58.509634Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.511161Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.514939Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-27T23:55:58.575613Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.575725Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.577155Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.577571Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.581503Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-27T23:55:58.582180Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-27T23:55:58.643010Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.643125Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.644536Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.644917Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.648882Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-27T23:55:58.650477Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T23:55:58.709701Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.711138Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.714871Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-27T23:55:58.743411Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.743518Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.744867Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.745246Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.749581Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-27T23:55:58.761821Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.763194Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.767099Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T23:55:58.790352Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-27T23:55:58.795656Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.795758Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.797088Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.797469Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.801575Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-27T23:55:58.802563Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-27T23:55:58.862333Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.862427Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.863768Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.864157Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.869314Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T23:55:58.870423Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T23:55:58.978514Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.979922Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.983742Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T23:55:59.012297Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.013719Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.017312Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-27T23:55:59.077935Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.078035Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.079322Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.079673Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.084240Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-27T23:55:59.085991Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T23:55:59.144491Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.146636Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.147331Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.151934Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.152657Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T23:55:59.156062Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-27T23:55:59.216735Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.218055Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.221868Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-27T23:55:59.282640Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.284621Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.288351Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-27T23:55:59.349114Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.351198Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.354940Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-27T23:55:59.415788Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.417826Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.422054Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T23:56:00.284388Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.285697Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.289787Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T23:56:00.450557Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.451818Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.455539Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-27T23:56:00.516161Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.517408Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.521398Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T23:56:00.632092Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.633305Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.637019Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-27T23:56:00.697684Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.698944Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.702593Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-27T23:56:00.763372Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.765434Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.768900Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-27T23:56:00.830006Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.831855Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.835481Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T23:56:01.397696Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.400197Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.404022Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-27T23:56:01.464783Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.466569Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.470310Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T23:56:01.781848Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.783645Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.787170Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-27T23:56:01.848024Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.849227Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.852757Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-27T23:56:01.913567Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.914709Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.917996Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-27T23:56:01.946795Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.947924Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.951463Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T23:56:01.964181Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.965238Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.968666Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T23:56:02.029625Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.030722Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.034266Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-27T23:56:02.095015Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.096145Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.100011Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T23:56:02.210738Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.211792Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.215342Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-27T23:56:02.276022Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.277218Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.280572Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-27T23:56:02.341481Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.342541Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.346164Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-27T23:56:02.406784Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.406917Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.407938Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.408363Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.412990Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-27T23:56:02.414286Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T23:56:02.473719Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.474770Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.478818Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T23:56:02.507371Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.508424Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.511938Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-27T23:56:02.572611Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.573682Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.577028Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-27T23:56:02.638034Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.639541Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.643112Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-27T23:56:02.671712Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.672756Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.676351Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-27T23:56:02.688925Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.690343Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.693767Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-27T23:56:02.722441Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.723482Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.727404Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T23:56:02.739913Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.904657Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.905625Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.909063Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-27T23:56:02.969844Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.284729Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.285649Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.288962Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-27T23:56:03.349798Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.814902Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.815787Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:56:03.819426Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-27T23:56:03.880058Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.094672Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.095534Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.098990Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-27T23:56:04.159659Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.574642Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.575566Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.578604Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-27T23:56:04.639687Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.854255Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.855092Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.858493Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-27T23:56:04.919288Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.033663Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.034493Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.037541Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-27T23:56:05.098734Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.099384Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.099649Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.100103Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.100762Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.107625Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T23:56:05.109311Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T23:56:05.110729Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T23:56:05.166067Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.166145Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.166186Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.166492Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.166847Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.170622Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T23:56:05.171450Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T23:56:05.231318Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.231384Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.231646Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T23:56:05.234453Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T23:56:05.295611Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:09.965814Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T23:56:24.014679Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T23:56:24.014679Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] 
[2026-05-27T23:56:24.014679Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T23:56:24.014749Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] 
[2026-05-27T23:56:24.014762Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T23:56:24.014774Z] [nf-2c82578071d2b5406be45b8c94098cd9-34f5c-6dsh5] [788_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec