File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/116fb495c37d4a63972c1e72668c19/.command.err
Size
1.2 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-p5sfzh2q because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-27 23:59:46,879 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-27 23:59:47,678 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-27 23:59:47,851 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-27 23:59:48,862 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-27 23:59:49,015 - cnv_pipe.batch.run_model - INFO - Processing cluster 99 with 200 probes
2026-05-27 23:59:49,387 - cnv_pipe.batch.run_model.cluster99 - INFO - Child process started for cluster 99 with 200 probes
2026-05-28 00:00:49,445 - cnv_pipe.batch.run_model.cluster99 - INFO - Child process finished cluster 99. Wrote cluster_99_samples.csv and cluster_99_params.csv
2026-05-28 00:00:49,446 - cnv_pipe.batch.run_model - INFO - Cluster 99 finished in 60.43 seconds. Status: SUCCESS