File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/72/2bb1266c899c1e0601fca1e1488515/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_uilx7h4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 00:00:59,825 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 00:01:00,616 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 00:01:00,786 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 00:01:01,906 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 00:01:01,974 - cnv_pipe.batch.run_model - INFO - Processing cluster 731 with 198 probes
2026-05-28 00:01:02,362 - cnv_pipe.batch.run_model.cluster731 - INFO - Child process started for cluster 731 with 198 probes
2026-05-28 00:02:01,672 - cnv_pipe.batch.run_model.cluster731 - INFO - Child process finished cluster 731. Wrote cluster_731_samples.csv and cluster_731_params.csv
2026-05-28 00:02:01,674 - cnv_pipe.batch.run_model - INFO - Cluster 731 finished in 59.70 seconds. Status: SUCCESS