cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_Blood.md.bam --algo AlignmentStat Sig_18_Blood.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo Sig_18_Blood.sentieon.insert_size_metrics --algo QualDistribution Sig_18_Blood.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle Sig_18_Blood.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle Sig_18_Blood.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:153000001, elapsed 0.1s, est remaining 1.3s, peak mem 81MB, user 0.1s, sys 1.4s, output queue size 52
progress 10% @chr2:96000001, elapsed 0.1s, est remaining 1.1s, peak mem 81MB, user 0.2s, sys 3.2s, output queue size 32
progress 15% @chr2:225000001, elapsed 0.2s, est remaining 1.1s, peak mem 81MB, user 0.3s, sys 5.1s, output queue size 33
progress 20% @chr3:151000001, elapsed 0.3s, est remaining 1.0s, peak mem 81MB, user 0.4s, sys 6.8s, output queue size 22
progress 25% @chr4:107000001, elapsed 0.3s, est remaining 0.9s, peak mem 81MB, user 0.5s, sys 8.7s, output queue size 10
progress 30% @chr5:80000001, elapsed 0.4s, est remaining 0.9s, peak mem 81MB, user 0.7s, sys 10.7s, output queue size 19
progress 35% @chr6:63000001, elapsed 0.5s, est remaining 0.8s, peak mem 81MB, user 0.8s, sys 12.6s, output queue size 15
progress 40% @chr7:70000001, elapsed 0.5s, est remaining 0.8s, peak mem 81MB, user 0.9s, sys 14.5s, output queue size 6
progress 45% @chr8:69000001, elapsed 0.6s, est remaining 0.7s, peak mem 81MB, user 1.0s, sys 16.5s, output queue size 7
progress 50% @chr9:69000001, elapsed 0.6s, est remaining 0.6s, peak mem 81MB, user 1.1s, sys 18.4s, output queue size 23
progress 55% @chr10:93000001, elapsed 0.7s, est remaining 0.6s, peak mem 81MB, user 1.2s, sys 20.4s, output queue size 19
progress 60% @chr11:116000001, elapsed 0.8s, est remaining 0.5s, peak mem 81MB, user 1.4s, sys 22.4s, output queue size 23
progress 65% @chr13:30000001, elapsed 0.9s, est remaining 0.5s, peak mem 81MB, user 1.5s, sys 24.4s, output queue size 14
progress 70% @chr14:78000001, elapsed 0.9s, est remaining 0.4s, peak mem 81MB, user 1.6s, sys 26.3s, output queue size 7
progress 75% @chr15:81000001, elapsed 1.0s, est remaining 0.3s, peak mem 81MB, user 1.7s, sys 28.3s, output queue size 34
progress 80% @chr18:17000001, elapsed 1.1s, est remaining 0.3s, peak mem 81MB, user 1.8s, sys 30.4s, output queue size 15
progress 85% @chr20:32000001, elapsed 1.1s, est remaining 0.2s, peak mem 81MB, user 2.0s, sys 32.4s, output queue size 11
progress 90% @chrX:34000001, elapsed 1.2s, est remaining 0.1s, peak mem 99MB, user 2.8s, sys 33.3s, output queue size 114
progress 95% @chrY:44000001, elapsed 1.3s, est remaining 0.1s, peak mem 108MB, user 3.7s, sys 34.8s, output queue size 276
progress 100% @chr21:41000001, elapsed 2.1s, est remaining 0.0s, peak mem 123MB, user 6.3s, sys 36.9s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 52290594
reads: 1001133
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.688 user 18.372 sys 20.455 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.002 user 0.004 sys 2.126 real
idle: 78 calls 0.005 user 0.015 sys 51.857 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 129073152 mem 6.482 user 37.586 sys 3.174 real