File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/a405425004ec2fab6a320dba154a3d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fa30s2lx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 00:01:43,704 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 00:01:44,497 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 00:01:44,665 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 00:01:45,591 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 00:01:45,754 - cnv_pipe.batch.run_model - INFO - Processing cluster 1029 with 198 probes
2026-05-28 00:01:46,135 - cnv_pipe.batch.run_model.cluster1029 - INFO - Child process started for cluster 1029 with 198 probes
2026-05-28 00:02:43,843 - cnv_pipe.batch.run_model.cluster1029 - INFO - Child process finished cluster 1029. Wrote cluster_1029_samples.csv and cluster_1029_params.csv
2026-05-28 00:02:43,844 - cnv_pipe.batch.run_model - INFO - Cluster 1029 finished in 58.09 seconds. Status: SUCCESS