File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/721ae11ba9b32cb6e2ef7eb1b45ab0/.command.err
Size
63.3 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr1_68991-70108.bed)
Attempt

Content

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[2026-05-27T23:55:53.395961Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-27T23:55:53.405305Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-27T23:55:53.405344Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-27T23:55:53.405352Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-27T23:55:53.405364Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXWE5uS5'
[2026-05-27T23:55:53.405370Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-27T23:55:53.405378Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-27T23:55:53.405384Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-27T23:55:53.405390Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-27T23:55:53.405396Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-27T23:55:53.405402Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-27T23:55:53.405408Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-27T23:55:53.405416Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-27T23:55:53.405422Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-27T23:55:53.406112Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-27T23:55:53.406242Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-27T23:55:53.415745Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-27T23:55:53.416481Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-27T23:55:53.416871Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-27T23:55:53.417174Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-27T23:55:53.417418Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.418186Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.418450Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.419061Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_000_chr1_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.419305Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.421951Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.422385Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-27T23:55:53.422780Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.423125Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.423284Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.423554Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.423713Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.424172Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.425684Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.426040Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.426238Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.426603Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.426974Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.427492Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.427608Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.428005Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.428198Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.428810Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.428936Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.429125Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.429242Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.429447Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.429587Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.429912Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.430403Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0012' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.430618Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.430725Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0013' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.431025Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0014' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.431623Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0014' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.431837Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0015' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.431962Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0015' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.432160Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0016' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.432285Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0016' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.432495Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0017' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.432756Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0017' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.433436Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0018' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.433607Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0018' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.433810Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0019' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.433924Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0019' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.435025Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_000_chr1_0020' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.435654Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_000_chr1_0020' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.435944Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.436161Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.436362Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.436472Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.436715Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.437183Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.437997Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.438119Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.438359Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.438469Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.438668Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.438777Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.439111Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.439907Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.440112Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.440222Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.440460Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.440583Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.440770Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.440902Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.441318Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.442217Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.464688Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.465564Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.465900Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.466028Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.467381Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.467540Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.467788Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.470174Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.470324Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.471178Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.471916Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.472503Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.473136Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0014' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.473317Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-27T23:55:53.474115Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-27T23:55:53.474354Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0019' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.475249Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.475752Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0018' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.480475Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0001] Task initiated on local node
[2026-05-27T23:55:53.482382Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:53.490765Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0005] Task initiated on local node
[2026-05-27T23:55:53.491906Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0019] Task initiated on local node
[2026-05-27T23:55:53.495522Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0014] Task initiated on local node
[2026-05-27T23:55:53.500691Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0007] Task initiated on local node
[2026-05-27T23:55:54.820164Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.821533Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.825546Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0011] Task initiated on local node
[2026-05-27T23:55:54.936365Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.937741Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:54.941759Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0009] Task initiated on local node
[2026-05-27T23:55:55.716822Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0009] Task initiated on local node
[2026-05-27T23:55:55.754050Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.755245Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:55:55.758793Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0003] Task initiated on local node
[2026-05-27T23:55:56.320827Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0018] Task initiated on local node
[2026-05-27T23:55:56.321181Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0018' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.321231Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.322284Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.322768Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.326737Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0007] Task initiated on local node
[2026-05-27T23:55:56.328116Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0008] Task initiated on local node
[2026-05-27T23:55:56.387575Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.388716Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.392431Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0010] Task initiated on local node
[2026-05-27T23:55:56.405095Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.406378Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.409915Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0000] Task initiated on local node
[2026-05-27T23:55:56.438840Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.439890Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.443079Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0010] Task initiated on local node
[2026-05-27T23:55:56.506962Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0004] Task initiated on local node
[2026-05-27T23:55:56.554262Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.554354Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.554400Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.555511Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.555831Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.556487Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.560938Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0001] Task initiated on local node
[2026-05-27T23:55:56.562430Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0000] Task initiated on local node
[2026-05-27T23:55:56.563740Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0001] Task initiated on local node
[2026-05-27T23:55:56.624263Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.625269Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.628629Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0006] Task initiated on local node
[2026-05-27T23:55:56.689643Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.690732Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0014' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.693916Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0014] Task initiated on local node
[2026-05-27T23:55:56.754900Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0014' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.755910Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0016' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.759771Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0016] Task initiated on local node
[2026-05-27T23:55:56.870457Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0019' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.871473Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.875766Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0008] Task initiated on local node
[2026-05-27T23:55:56.936103Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.937230Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.940860Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0004] Task initiated on local node
[2026-05-27T23:55:56.978929Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.979974Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:55:56.983840Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0013] Task initiated on local node
[2026-05-27T23:55:57.145055Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.146232Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.149838Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0010] Task initiated on local node
[2026-05-27T23:55:57.210977Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.212115Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0018' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.215961Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0018] Task initiated on local node
[2026-05-27T23:55:57.279089Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0018' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.280146Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.283576Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0009] Task initiated on local node
[2026-05-27T23:55:57.344996Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.346076Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.349219Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0011] Task initiated on local node
[2026-05-27T23:55:57.410579Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.411661Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.415388Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0008] Task initiated on local node
[2026-05-27T23:55:57.878281Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.879429Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.883256Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0003] Task initiated on local node
[2026-05-27T23:55:57.944118Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.945084Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0019' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.948475Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0019] Task initiated on local node
[2026-05-27T23:55:57.977391Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.978526Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:55:57.982069Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0000] Task initiated on local node
[2026-05-27T23:55:58.010810Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0019' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.011701Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.014892Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0005] Task initiated on local node
[2026-05-27T23:55:58.027766Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.028684Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0020' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.032602Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0020] Task initiated on local node
[2026-05-27T23:55:58.143465Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.144481Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.148143Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0011] Task initiated on local node
[2026-05-27T23:55:58.259092Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.260097Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.263515Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0011] Task initiated on local node
[2026-05-27T23:55:58.324516Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.325527Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.328720Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0010] Task initiated on local node
[2026-05-27T23:55:58.389809Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.389933Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.390873Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.391226Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.395318Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0006] Task initiated on local node
[2026-05-27T23:55:58.395686Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0002] Task initiated on local node
[2026-05-27T23:55:58.455658Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.456487Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.459287Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0005] Task initiated on local node
[2026-05-27T23:55:58.520579Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.521499Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0016' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.524622Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0016] Task initiated on local node
[2026-05-27T23:55:58.585732Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0016' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.586592Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0009' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.589677Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0009] Task initiated on local node
[2026-05-27T23:55:58.651192Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0009' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.652065Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.655699Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0012] Task initiated on local node
[2026-05-27T23:55:58.917112Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.918033Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0008' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.921748Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0008] Task initiated on local node
[2026-05-27T23:55:58.990495Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0008' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.991110Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:58.994468Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0007] Task initiated on local node
[2026-05-27T23:55:59.105574Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.106480Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.110560Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0007] Task initiated on local node
[2026-05-27T23:55:59.170788Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.171530Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0017' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.175090Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0017] Task initiated on local node
[2026-05-27T23:55:59.536430Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.537263Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:55:59.541094Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0002] Task initiated on local node
[2026-05-27T23:56:00.153475Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.154418Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0001' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.158307Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0001] Task initiated on local node
[2026-05-27T23:56:00.218714Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0001' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.219512Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.223106Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0006] Task initiated on local node
[2026-05-27T23:56:00.584595Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.585530Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.589271Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0003] Task initiated on local node
[2026-05-27T23:56:00.618007Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0020' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.618794Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0013' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.622334Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0013] Task initiated on local node
[2026-05-27T23:56:00.683036Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0013' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.683872Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0020' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.687524Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0020] Task initiated on local node
[2026-05-27T23:56:00.748347Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0020' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.749076Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:56:00.752753Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0004] Task initiated on local node
[2026-05-27T23:56:01.015686Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.016346Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0005' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.019719Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0005] Task initiated on local node
[2026-05-27T23:56:01.080904Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0005' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.081776Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0015' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.085247Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_000_chr1_0015] Task initiated on local node
[2026-05-27T23:56:01.396897Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0017' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.397787Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0017' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.401243Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0017] Task initiated on local node
[2026-05-27T23:56:01.429988Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0017' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.430791Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_000_chr1_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.433369Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_000_chr1_0000] Task initiated on local node
[2026-05-27T23:56:01.494673Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_000_chr1_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.495419Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0000' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.498451Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0000] Task initiated on local node
[2026-05-27T23:56:01.503230Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.503905Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0012' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.507179Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0012] Task initiated on local node
[2026-05-27T23:56:01.536056Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0000' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.550429Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0012' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.865064Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.865751Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:56:01.869606Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0002] Task initiated on local node
[2026-05-27T23:56:01.930665Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.345536Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.346211Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0002' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.349390Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0002] Task initiated on local node
[2026-05-27T23:56:02.410477Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0002' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.775402Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.776056Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.779644Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0006] Task initiated on local node
[2026-05-27T23:56:02.840437Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.840523Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.841110Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.844357Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0004] Task initiated on local node
[2026-05-27T23:56:02.873265Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.873920Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0015' from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.876776Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0015] Task initiated on local node
[2026-05-27T23:56:02.882571Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:02.914465Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0015' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.333226Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_000_chr1_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.333934Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0003' from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.337079Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_000_chr1_0003] Task initiated on local node
[2026-05-27T23:56:04.398216Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_000_chr1_0003' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.398606Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.398850Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.399276Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.399957Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.405062Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-27T23:56:04.408299Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-27T23:56:04.409019Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-27T23:56:04.465145Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.465236Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.465270Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.465559Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.465947Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.469053Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-27T23:56:04.504125Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-27T23:56:04.530635Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.530798Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.531079Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-27T23:56:04.534364Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-27T23:56:04.595260Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-27T23:56:12.414725Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-27T23:56:26.524879Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-27T23:56:26.524879Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] 
[2026-05-27T23:56:26.524879Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-27T23:56:26.525152Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] 
[2026-05-27T23:56:26.525164Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-27T23:56:26.525175Z] [nf-15721ae11ba9b32cb6e2ef7eb1b45ab0-dfe55-bwxqm] [632_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec