File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/1c9b482a91972816ddc6ba06750dd6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8p7gew23 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 00:01:17,144 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 00:01:17,967 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 00:01:18,140 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 00:01:19,089 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 00:01:19,278 - cnv_pipe.batch.run_model - INFO - Processing cluster 901 with 165 probes
2026-05-28 00:01:19,652 - cnv_pipe.batch.run_model.cluster901 - INFO - Child process started for cluster 901 with 165 probes
2026-05-28 00:02:09,562 - cnv_pipe.batch.run_model.cluster901 - INFO - Child process finished cluster 901. Wrote cluster_901_samples.csv and cluster_901_params.csv
2026-05-28 00:02:09,563 - cnv_pipe.batch.run_model - INFO - Cluster 901 finished in 50.28 seconds. Status: SUCCESS