File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/997242b88dde5596c2a4f740c57a15/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_ezhs9mj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:41:15,831 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:41:16,678 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:41:16,860 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:41:17,844 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:41:18,047 - cnv_pipe.batch.run_model - INFO - Processing cluster 701 with 200 probes
2026-05-28 05:41:18,435 - cnv_pipe.batch.run_model.cluster701 - INFO - Child process started for cluster 701 with 200 probes
2026-05-28 05:42:19,117 - cnv_pipe.batch.run_model.cluster701 - INFO - Child process finished cluster 701. Wrote cluster_701_samples.csv and cluster_701_params.csv
2026-05-28 05:42:19,119 - cnv_pipe.batch.run_model - INFO - Cluster 701 finished in 61.07 seconds. Status: SUCCESS