Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/59b0ea863724dd1fd285e5183168cd/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6e/13810229ade520c3d1072b5374a867/Sig_18_tissue.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6e/13810229ade520c3d1072b5374a867/Sig_18_tissue.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/59b0ea863724dd1fd285e5183168cd/.command.run
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-05-28T05:36:14.750068Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-28T05:36:14.750972Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-28T05:36:14.750984Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-28T05:36:14.750988Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-28T05:36:14.750993Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXKwh2io'
[2026-05-28T05:36:14.750997Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-28T05:36:14.751002Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-28T05:36:14.751005Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-28T05:36:14.751009Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-05-28T05:36:14.751013Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-28T05:36:14.751016Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-28T05:36:14.751020Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-28T05:36:14.751024Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-28T05:36:14.751028Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-28T05:36:14.751594Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-28T05:36:14.751712Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-28T05:36:14.757661Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-28T05:36:14.758779Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-28T05:36:14.759146Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-28T05:36:14.759487Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-28T05:36:14.759943Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.760395Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.760490Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.760563Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.760700Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.760773Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.760897Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.760961Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.761152Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.761945Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.762196Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.762660Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.763115Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.763718Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.763917Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.766087Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.767535Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.768074Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-28T05:36:14.768860Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.768965Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.769212Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.769284Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.769402Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.769473Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.769587Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.769651Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.769935Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.770444Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.771259Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.771662Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.771822Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.771896Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.772030Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.772095Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.772211Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.772280Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.772459Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.772526Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.773033Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.773477Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.773648Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.773719Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.773841Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.773909Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.774022Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.774091Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.774241Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.774322Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.775088Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.775667Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.775839Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.775953Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.776115Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.776193Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.776379Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.776487Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.776977Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.777652Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.777864Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.777977Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.778173Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.778287Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.778469Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.778919Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.779787Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.779918Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.780088Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.780171Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.781961Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.782469Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.782619Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.782690Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.782809Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.782877Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.784869Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.785741Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.785892Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.785968Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.786089Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.786160Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.786283Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.786352Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.786477Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.786546Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.786685Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.787034Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.787804Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.787888Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.788006Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.788075Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.788200Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.788268Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.788380Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.788447Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.788562Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.788631Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.789259Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.790148Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.798704Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.802569Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.803444Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.805087Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.806281Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.807681Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.808665Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.810270Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.812971Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.820570Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-05-28T05:36:14.823228Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-05-28T05:36:14.831839Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-05-28T05:36:14.833016Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-05-28T05:36:14.833487Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-05-28T05:36:14.836824Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-05-28T05:36:14.840740Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-05-28T05:36:14.844338Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-05-28T05:36:14.846717Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.846915Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.846996Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.848040Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.848117Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.848545Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.848620Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.848795Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.848891Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:14.848952Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-28T05:36:14.964877Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.965011Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.965041Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.966179Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.966633Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.967503Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.977030Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-05-28T05:36:14.981011Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-05-28T05:36:14.982455Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-05-28T05:36:15.486161Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.487478Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.491404Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-05-28T05:36:16.004073Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.005274Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.009122Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-05-28T05:36:16.270958Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.272298Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.276041Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-05-28T05:36:16.305137Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.306458Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.310846Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-05-28T05:36:16.339246Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.340582Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.344463Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-05-28T05:36:16.405741Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.407097Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.411216Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-05-28T05:36:16.472289Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.473612Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.476253Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.477407Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.477958Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-05-28T05:36:16.481354Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-05-28T05:36:16.542574Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.543805Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.547963Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-05-28T05:36:16.608932Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.610120Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.613834Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-05-28T05:36:16.725202Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.726390Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.730458Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-05-28T05:36:16.759196Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.760360Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.763974Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-05-28T05:36:17.627936Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.630239Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.634365Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-05-28T05:36:17.896327Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.897528Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.901285Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-05-28T05:36:17.962516Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.963673Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.967137Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-05-28T05:36:17.980167Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.981221Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.984921Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-05-28T05:36:18.045854Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.046989Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.050479Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-05-28T05:36:18.111570Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.112713Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.116261Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-05-28T05:36:18.478544Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.479813Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.483571Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-05-28T05:36:18.544932Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.545989Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.549303Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-05-28T05:36:18.610708Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.611790Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.615671Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-05-28T05:36:18.777214Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.778362Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.782526Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-05-28T05:36:18.843078Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.844138Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.847561Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-05-28T05:36:18.909123Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.910244Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.913877Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-05-28T05:36:18.975272Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.976358Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.980376Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-05-28T05:36:19.041293Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.042265Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.045663Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-05-28T05:36:19.106732Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.107836Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.111382Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-05-28T05:36:19.140573Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.141612Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.144873Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-05-28T05:36:19.149772Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.150622Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.153848Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-05-28T05:36:19.182942Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.183911Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.187319Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-05-28T05:36:19.188353Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.189213Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.192395Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-05-28T05:36:19.221877Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.222847Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.227014Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-05-28T05:36:19.287798Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.288841Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.292952Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-05-28T05:36:19.504610Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.505669Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.509307Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-05-28T05:36:19.570255Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.570375Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.571327Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.571902Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.576327Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-05-28T05:36:19.577367Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-05-28T05:36:19.639395Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.640402Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.644102Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-05-28T05:36:19.705538Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.706729Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.710598Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-05-28T05:36:19.771531Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.772399Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.776264Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-05-28T05:36:19.837654Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.839117Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.839672Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.842495Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.844533Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-05-28T05:36:19.845864Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-05-28T05:36:19.906993Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.907093Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.908000Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.908394Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.912528Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-05-28T05:36:19.913955Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-05-28T05:36:19.974078Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.975070Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.979273Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-05-28T05:36:20.090858Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.091947Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.095967Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-05-28T05:36:20.156944Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.157906Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.161619Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-05-28T05:36:20.222605Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.223470Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.227373Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-05-28T05:36:20.388961Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.389885Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.393571Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-05-28T05:36:20.755940Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.756829Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.760368Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-05-28T05:36:20.821468Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.822378Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.826062Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-05-28T05:36:20.887345Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.887453Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.887494Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.888343Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.888834Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.889479Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.893201Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-05-28T05:36:20.897063Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-05-28T05:36:20.897993Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-05-28T05:36:20.955976Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.956081Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.956936Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.957278Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.961017Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-05-28T05:36:20.962939Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-05-28T05:36:21.022371Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.022483Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.023658Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.024159Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.025081Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.029170Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.031077Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-05-28T05:36:21.032092Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-05-28T05:36:21.035771Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-05-28T05:36:21.096756Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.096849Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.096875Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.097634Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.098156Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.098777Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.102722Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-05-28T05:36:21.104689Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-05-28T05:36:21.105890Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-05-28T05:36:21.163650Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.163748Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.163782Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.164505Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.165023Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.165335Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.170422Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-05-28T05:36:21.171436Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-05-28T05:36:21.174073Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-05-28T05:36:21.199655Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.200395Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.204537Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-05-28T05:36:21.204870Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.204925Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.205559Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.205848Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.209202Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-05-28T05:36:21.210142Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-05-28T05:36:21.270336Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.270410Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.271015Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.271521Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.275217Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-05-28T05:36:21.277215Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-05-28T05:36:21.304479Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.305203Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.308271Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-05-28T05:36:21.309139Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.309719Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.312853Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-05-28T05:36:21.374195Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.374297Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.374324Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.374971Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.375322Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.375537Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.380258Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-05-28T05:36:21.380556Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-05-28T05:36:21.381394Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-05-28T05:36:21.442416Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.442511Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.442540Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.443167Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.443565Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.444026Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.447905Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-05-28T05:36:21.449814Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-05-28T05:36:21.451106Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-05-28T05:36:21.509113Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.509214Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.509846Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.510418Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.514416Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-05-28T05:36:21.515625Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-05-28T05:36:21.575424Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.575550Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.576126Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.579466Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-05-28T05:36:21.640837Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.859301Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.859951Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.863848Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-05-28T05:36:22.892723Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.893358Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.896568Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-05-28T05:36:22.901296Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.933410Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.098112Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.098790Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.102020Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-05-28T05:36:23.163443Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.278006Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.278789Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.282324Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-05-28T05:36:23.343556Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.608250Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.608940Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.612509Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-05-28T05:36:23.673500Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.191718Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.192911Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.195859Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-05-28T05:36:30.257423Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.257697Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.257819Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.258103Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.258522Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.262900Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-28T05:36:30.264257Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-28T05:36:30.265345Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-28T05:36:30.291014Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.291076Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.291100Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.291286Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.291583Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.294246Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-28T05:36:30.294653Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-28T05:36:30.323997Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.324058Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.324229Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.326676Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-28T05:36:30.356259Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.779729Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-28T05:36:47.870368Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-28T05:36:47.870368Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] 
[2026-05-28T05:36:47.870368Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-28T05:36:47.870449Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] 
[2026-05-28T05:36:47.870458Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-28T05:36:47.870467Z] [nf-4059b0ea863724dd1fd285e5183168cd-33bcb-kwkpg] [621_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec