File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/444e2648d623c7d0714b5563a9c461/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-w2qbw1lk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:40:32,477 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:40:33,403 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:40:33,583 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:40:34,617 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:40:34,794 - cnv_pipe.batch.run_model - INFO - Processing cluster 861 with 197 probes
2026-05-28 05:40:35,190 - cnv_pipe.batch.run_model.cluster861 - INFO - Child process started for cluster 861 with 197 probes
2026-05-28 05:41:38,981 - cnv_pipe.batch.run_model.cluster861 - INFO - Child process finished cluster 861. Wrote cluster_861_samples.csv and cluster_861_params.csv
2026-05-28 05:41:38,983 - cnv_pipe.batch.run_model - INFO - Cluster 861 finished in 64.19 seconds. Status: SUCCESS