cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo AlignmentStat HCC1395_BL.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo HCC1395_BL.sentieon.insert_size_metrics --algo QualDistribution HCC1395_BL.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle HCC1395_BL.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle HCC1395_BL.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:164000001, elapsed 0.0s, est remaining 0.5s, peak mem 81MB, user 0.1s, sys 0.4s, output queue size 3
progress 10% @chr2:77000001, elapsed 0.0s, est remaining 0.4s, peak mem 81MB, user 0.2s, sys 1.0s, output queue size 19
progress 15% @chr2:232000001, elapsed 0.1s, est remaining 0.4s, peak mem 81MB, user 0.2s, sys 1.6s, output queue size 17
progress 20% @chr3:150000001, elapsed 0.1s, est remaining 0.4s, peak mem 81MB, user 0.3s, sys 2.1s, output queue size 4
progress 25% @chr4:97000001, elapsed 0.1s, est remaining 0.3s, peak mem 81MB, user 0.3s, sys 2.7s, output queue size 18
progress 30% @chr5:89000001, elapsed 0.1s, est remaining 0.3s, peak mem 81MB, user 0.4s, sys 3.3s, output queue size 11
progress 35% @chr6:49000001, elapsed 0.2s, est remaining 0.3s, peak mem 81MB, user 0.5s, sys 3.9s, output queue size 16
progress 40% @chr7:58000001, elapsed 0.2s, est remaining 0.3s, peak mem 81MB, user 0.6s, sys 4.5s, output queue size 24
progress 45% @chr8:38000001, elapsed 0.2s, est remaining 0.2s, peak mem 81MB, user 0.7s, sys 5.1s, output queue size 19
progress 50% @chr9:77000001, elapsed 0.2s, est remaining 0.2s, peak mem 81MB, user 0.8s, sys 5.6s, output queue size 19
progress 55% @chr10:98000001, elapsed 0.2s, est remaining 0.2s, peak mem 81MB, user 0.8s, sys 6.1s, output queue size 15
progress 60% @chr11:122000001, elapsed 0.3s, est remaining 0.2s, peak mem 81MB, user 0.9s, sys 6.6s, output queue size 13
progress 65% @chr13:19000001, elapsed 0.3s, est remaining 0.2s, peak mem 81MB, user 1.1s, sys 7.2s, output queue size 7
progress 70% @chr14:56000001, elapsed 0.3s, est remaining 0.1s, peak mem 81MB, user 1.2s, sys 7.9s, output queue size 14
progress 75% @chr16:13000001, elapsed 0.3s, est remaining 0.1s, peak mem 81MB, user 1.3s, sys 8.4s, output queue size 26
progress 80% @chr18:2000001, elapsed 0.3s, est remaining 0.1s, peak mem 81MB, user 1.4s, sys 8.9s, output queue size 17
progress 85% @chr20:25000001, elapsed 0.4s, est remaining 0.1s, peak mem 81MB, user 1.4s, sys 9.4s, output queue size 18
progress 90% @chrX:44000001, elapsed 0.4s, est remaining 0.0s, peak mem 96MB, user 1.8s, sys 9.8s, output queue size 114
progress 95% @chrY:42000001, elapsed 0.4s, est remaining 0.0s, peak mem 108MB, user 2.4s, sys 9.9s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.2s, est remaining 0.0s, peak mem 135MB, user 5.6s, sys 10.2s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 51395364
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.196 user 5.011 sys 6.640 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.005 user 0.005 sys 1.236 real
idle: 79 calls 0.026 user 0.029 sys 52.319 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 141713408 mem 5.831 user 10.796 sys 2.278 real