Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/6d028a1e5da86f1a6b3bac063e6496/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6e/13810229ade520c3d1072b5374a867/Sig_18_tissue.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6e/13810229ade520c3d1072b5374a867/Sig_18_tissue.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/6d028a1e5da86f1a6b3bac063e6496/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
==> STAGING COMPLETE (10 inputs)

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXO9qNMo/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXO9qNMo/chr6_138229684-138229952.bed.gz.tbi

Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXO9qNMo/chr6_138229684-138229952.bed.gz.tbi
[2026-05-28T05:36:13.573634Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-28T05:36:13.574305Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-28T05:36:13.574319Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-28T05:36:13.574325Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-28T05:36:13.574331Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXO9qNMo'
[2026-05-28T05:36:13.574337Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-28T05:36:13.574346Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-28T05:36:13.574352Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-28T05:36:13.574358Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-28T05:36:13.574365Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-28T05:36:13.574371Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-28T05:36:13.574377Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-28T05:36:13.574383Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-28T05:36:13.574388Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-28T05:36:13.575062Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-28T05:36:13.575226Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-28T05:36:13.581325Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-28T05:36:13.582169Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-28T05:36:13.582352Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-28T05:36:13.582697Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-28T05:36:13.583006Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.583552Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.583647Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.583718Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.583837Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.583903Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.584020Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.584095Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.584444Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.584675Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.584776Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.585088Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.585456Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.586034Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.587396Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.588032Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.588249Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.588408Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-28T05:36:13.588632Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.588708Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.588887Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.588957Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.589072Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.589140Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.589384Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.589616Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.589732Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.589798Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.589907Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.589974Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.590083Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.590171Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.590289Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.590349Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.590458Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.590524Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.590715Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.591164Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.591285Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.591352Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.591463Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.591524Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.591633Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.591699Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.591809Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.591872Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.591983Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.592048Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.592228Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.592359Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.592845Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.592916Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.593026Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.593088Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.593198Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.593259Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.593370Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.593432Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.593537Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.593600Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.593713Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.593775Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.594046Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.594529Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.594642Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.594709Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.594833Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.594899Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.595012Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.595078Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.595186Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.595251Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.595359Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.595421Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.596871Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.597510Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.597637Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.597705Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.597818Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.597882Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.597991Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.598054Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.598167Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.598229Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.598337Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.598402Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.598585Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.598760Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.599031Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.599752Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.600429Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.600493Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.600600Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.600662Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.600771Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.600833Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.600956Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.601019Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.601130Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.601195Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.601369Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.601524Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.602282Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.602354Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.602464Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.602531Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.602639Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.602703Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.602829Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.602895Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.605283Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.605957Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.606229Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.606298Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.620347Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.621200Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.621317Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.621584Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.621805Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.622821Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.623008Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.623471Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.623701Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.624244Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.624449Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.625029Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.625613Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.626253Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.626890Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.627600Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.628917Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.629512Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.630009Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-28T05:36:13.633238Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-28T05:36:13.637548Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-28T05:36:13.640278Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-28T05:36:13.644295Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-28T05:36:13.644589Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-28T05:36:13.647148Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-28T05:36:13.650153Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-28T05:36:13.651313Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-28T05:36:13.715096Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.716232Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.718425Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.718556Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.719630Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-28T05:36:13.719942Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.720228Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.723424Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-28T05:36:13.724373Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-28T05:36:14.488564Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.488646Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.489831Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.490437Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.493760Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-28T05:36:14.494814Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-28T05:36:14.524604Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.525793Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.528395Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-28T05:36:14.590008Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.591284Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.594299Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-28T05:36:14.607163Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.608313Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.611131Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-28T05:36:14.823160Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.824312Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.827057Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-28T05:36:14.856448Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.857522Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.860685Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-28T05:36:15.022321Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.023502Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.024052Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.026533Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.027014Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-28T05:36:15.029311Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-28T05:36:15.090849Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.090942Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.092069Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.092887Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.095887Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-28T05:36:15.097024Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-28T05:36:15.157408Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.157495Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.158625Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.158866Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.161879Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-28T05:36:15.163310Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-28T05:36:15.191546Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.192697Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.195512Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-28T05:36:15.457409Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.458671Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.461403Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-28T05:36:15.490800Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.491946Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.495265Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-28T05:36:15.706918Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.708058Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.710899Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-28T05:36:15.740221Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.741343Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.744063Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-28T05:36:15.773529Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.774639Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.777401Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-28T05:36:15.838880Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.840035Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.843089Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-28T05:36:15.954687Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.955848Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.958809Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-28T05:36:15.988124Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.989261Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.992170Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-28T05:36:16.005363Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.006356Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.009468Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-28T05:36:16.038626Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.039755Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.042625Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-28T05:36:16.047580Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.048607Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.051400Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-28T05:36:16.112907Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.114485Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.117257Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-28T05:36:16.228993Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.230394Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.233089Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-28T05:36:16.262375Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.262463Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.263495Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.263764Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.267115Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-28T05:36:16.296633Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.297736Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.300358Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-28T05:36:16.301671Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-28T05:36:16.305408Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.305448Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.306227Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.306496Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.309788Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-28T05:36:16.310337Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-28T05:36:16.370905Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.370987Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.371820Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.373565Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.375649Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-28T05:36:16.376703Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-28T05:36:16.406043Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.407104Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.410392Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-28T05:36:16.471341Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.472339Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.475102Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-28T05:36:16.536544Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.537555Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.540311Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-28T05:36:16.569722Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.570713Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.573720Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-28T05:36:16.685539Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.686569Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.689947Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-28T05:36:16.718662Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.719624Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.722353Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-28T05:36:16.834426Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.835480Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.838336Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-28T05:36:16.899657Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.900677Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.903711Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-28T05:36:17.115599Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.116635Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.119631Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-28T05:36:17.148744Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.149740Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.152897Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-28T05:36:17.314265Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.315232Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.318258Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-28T05:36:17.379795Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.380826Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.383862Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-28T05:36:17.413629Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.414610Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.417537Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-28T05:36:17.446835Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.447758Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.450844Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-28T05:36:17.512288Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.513260Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.516092Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-28T05:36:17.545718Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.546687Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.549745Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-28T05:36:17.578932Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.579878Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.582370Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-28T05:36:17.611864Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.612778Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.615590Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-28T05:36:17.646199Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.647122Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.650533Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-28T05:36:17.679155Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.680074Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.682803Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-28T05:36:17.894562Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.895552Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.899288Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-28T05:36:17.959851Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.959950Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.960858Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.961431Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.964643Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-28T05:36:17.965762Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-28T05:36:17.993834Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.995008Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.997820Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-28T05:36:18.027116Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.028008Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.030837Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-28T05:36:18.092205Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.093104Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.095983Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-28T05:36:18.125349Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.125435Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.126295Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.126740Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.129940Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-28T05:36:18.131372Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-28T05:36:18.392019Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.392923Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.395883Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-28T05:36:18.457464Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.458289Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.461051Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-28T05:36:18.522425Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.523539Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.526705Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-28T05:36:18.588027Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.589130Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.591893Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-28T05:36:18.621193Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.622301Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.624997Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-28T05:36:19.087343Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.088420Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.091565Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-28T05:36:19.152862Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.153719Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.156981Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-28T05:36:19.186136Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.186969Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.190005Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-28T05:36:19.219013Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.220177Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.220487Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.222936Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.224472Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-28T05:36:19.225484Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-28T05:36:19.255239Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.256054Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.259099Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-28T05:36:19.288241Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.289007Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.291634Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-28T05:36:19.453523Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.454351Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.457190Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-28T05:36:19.518693Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.519520Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.522458Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-28T05:36:19.684143Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.684931Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.688218Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-28T05:36:19.692799Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.693484Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.696151Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-28T05:36:19.725524Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.725619Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.726323Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.726819Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.729780Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-28T05:36:19.766045Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-28T05:36:19.791815Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.791894Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.792528Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.792861Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.796013Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-28T05:36:19.797009Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-28T05:36:19.825236Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.825318Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.825981Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.826332Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.829441Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-28T05:36:19.830201Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-28T05:36:19.859152Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.859223Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.859841Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.860292Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.863624Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-28T05:36:19.864970Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-28T05:36:19.975043Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.975758Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.978643Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-28T05:36:20.007876Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.007971Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.008724Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.009184Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.012247Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-28T05:36:20.039934Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-28T05:36:20.042294Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.042355Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.042928Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.043240Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.046263Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-28T05:36:20.047168Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-28T05:36:20.075831Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.076852Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.077138Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.079480Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.080227Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-28T05:36:20.082845Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-28T05:36:20.144224Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.144315Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.144960Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.145425Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.148640Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-28T05:36:20.192641Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-28T05:36:20.210009Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.210097Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.210692Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.213612Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-28T05:36:20.276352Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.390941Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.391542Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.394346Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-28T05:36:20.455764Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.570258Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.570745Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.573722Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-28T05:36:20.635006Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.635090Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.635660Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.638352Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-28T05:36:20.699688Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.699764Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.700327Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.703421Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-28T05:36:20.716618Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.717173Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.719838Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-28T05:36:20.733085Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.765393Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.130492Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.131077Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.133857Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-28T05:36:21.195603Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.195979Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.196149Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.196422Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.196742Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.201602Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-28T05:36:21.202896Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-28T05:36:21.204002Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-28T05:36:21.229054Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.229127Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.229368Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.229825Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.232256Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.232638Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-28T05:36:21.234667Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-28T05:36:21.265870Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.265957Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.266181Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.268972Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-28T05:36:21.330395Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.202516Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-28T05:36:32.462971Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-28T05:36:32.462971Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] 
[2026-05-28T05:36:32.462971Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-28T05:36:32.463049Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] 
[2026-05-28T05:36:32.463057Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-28T05:36:32.463065Z] [nf-d16d028a1e5da86f1a6b3bac063e6496-32c43-hx5wj] [580_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec