File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/b295f9bc77ed57591d0424327bcd4e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-uynh1mcu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:40:24,920 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:40:25,752 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:40:25,925 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:40:26,962 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:40:27,167 - cnv_pipe.batch.run_model - INFO - Processing cluster 730 with 176 probes
2026-05-28 05:40:27,552 - cnv_pipe.batch.run_model.cluster730 - INFO - Child process started for cluster 730 with 176 probes
2026-05-28 05:41:21,467 - cnv_pipe.batch.run_model.cluster730 - INFO - Child process finished cluster 730. Wrote cluster_730_samples.csv and cluster_730_params.csv
2026-05-28 05:41:21,468 - cnv_pipe.batch.run_model - INFO - Cluster 730 finished in 54.30 seconds. Status: SUCCESS