File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/e5e1da351c6d762dda43b1fd31a48a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-u_cwamm8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:41:47,020 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:41:47,882 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:41:48,054 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:41:49,025 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:41:49,195 - cnv_pipe.batch.run_model - INFO - Processing cluster 1147 with 180 probes
2026-05-28 05:41:49,571 - cnv_pipe.batch.run_model.cluster1147 - INFO - Child process started for cluster 1147 with 180 probes
2026-05-28 05:42:46,307 - cnv_pipe.batch.run_model.cluster1147 - INFO - Child process finished cluster 1147. Wrote cluster_1147_samples.csv and cluster_1147_params.csv
2026-05-28 05:42:46,309 - cnv_pipe.batch.run_model - INFO - Cluster 1147 finished in 57.11 seconds. Status: SUCCESS