File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ba/c3f5932bf6abd08832eb540ead332d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mkja3n0f because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:41:23,937 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:41:24,783 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:41:24,956 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:41:26,032 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:41:26,102 - cnv_pipe.batch.run_model - INFO - Processing cluster 1034 with 199 probes
2026-05-28 05:41:26,476 - cnv_pipe.batch.run_model.cluster1034 - INFO - Child process started for cluster 1034 with 199 probes
2026-05-28 05:42:26,177 - cnv_pipe.batch.run_model.cluster1034 - INFO - Child process finished cluster 1034. Wrote cluster_1034_samples.csv and cluster_1034_params.csv
2026-05-28 05:42:26,178 - cnv_pipe.batch.run_model - INFO - Cluster 1034 finished in 60.08 seconds. Status: SUCCESS