mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nv8o8pk8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:40:53,553 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:40:54,412 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:40:54,592 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:40:55,608 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:40:55,795 - cnv_pipe.batch.run_model - INFO - Processing cluster 961 with 199 probes
2026-05-28 05:40:56,178 - cnv_pipe.batch.run_model.cluster961 - INFO - Child process started for cluster 961 with 199 probes
2026-05-28 05:41:57,983 - cnv_pipe.batch.run_model.cluster961 - INFO - Child process finished cluster 961. Wrote cluster_961_samples.csv and cluster_961_params.csv
2026-05-28 05:41:57,985 - cnv_pipe.batch.run_model - INFO - Cluster 961 finished in 62.19 seconds. Status: SUCCESS