File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/60/07bda1ee7544f9b813e9de9093c0d4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-f5plgu5c because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:40:41,871 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:40:42,729 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:40:42,902 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:40:43,904 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:40:43,997 - cnv_pipe.batch.run_model - INFO - Processing cluster 906 with 166 probes
2026-05-28 05:40:44,498 - cnv_pipe.batch.run_model.cluster906 - INFO - Child process started for cluster 906 with 166 probes
2026-05-28 05:41:35,861 - cnv_pipe.batch.run_model.cluster906 - INFO - Child process finished cluster 906. Wrote cluster_906_samples.csv and cluster_906_params.csv
2026-05-28 05:41:35,862 - cnv_pipe.batch.run_model - INFO - Cluster 906 finished in 51.87 seconds. Status: SUCCESS