File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3e/65bffebc955f21ac19686e52b99ce4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s2253pt8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:41:17,079 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:41:17,961 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:41:18,138 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:41:19,330 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:41:19,579 - cnv_pipe.batch.run_model - INFO - Processing cluster 835 with 171 probes
2026-05-28 05:41:19,975 - cnv_pipe.batch.run_model.cluster835 - INFO - Child process started for cluster 835 with 171 probes
2026-05-28 05:42:14,340 - cnv_pipe.batch.run_model.cluster835 - INFO - Child process finished cluster 835. Wrote cluster_835_samples.csv and cluster_835_params.csv
2026-05-28 05:42:14,342 - cnv_pipe.batch.run_model - INFO - Cluster 835 finished in 54.76 seconds. Status: SUCCESS