File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e5/1496112c694ec1ac182df31d7e8030/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-imbh46uh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:40:48,472 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:40:49,791 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:40:50,085 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:40:51,889 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:40:52,011 - cnv_pipe.batch.run_model - INFO - Processing cluster 855 with 191 probes
2026-05-28 05:40:52,779 - cnv_pipe.batch.run_model.cluster855 - INFO - Child process started for cluster 855 with 191 probes
2026-05-28 05:42:29,853 - cnv_pipe.batch.run_model.cluster855 - INFO - Child process finished cluster 855. Wrote cluster_855_samples.csv and cluster_855_params.csv
2026-05-28 05:42:29,855 - cnv_pipe.batch.run_model - INFO - Cluster 855 finished in 97.84 seconds. Status: SUCCESS