File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ff/db7365fb86ded9c1c8f08f3e98c561/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-dbzuw1rx because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:40:38,274 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:40:39,102 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:40:39,273 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:40:40,216 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:40:40,388 - cnv_pipe.batch.run_model - INFO - Processing cluster 891 with 151 probes
2026-05-28 05:40:40,780 - cnv_pipe.batch.run_model.cluster891 - INFO - Child process started for cluster 891 with 151 probes
2026-05-28 05:41:27,221 - cnv_pipe.batch.run_model.cluster891 - INFO - Child process finished cluster 891. Wrote cluster_891_samples.csv and cluster_891_params.csv
2026-05-28 05:41:27,222 - cnv_pipe.batch.run_model - INFO - Cluster 891 finished in 46.83 seconds. Status: SUCCESS