File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/45/261a047028d4af4c7e6ca8a8d2ba00/.command.err
Size
53.7 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr16_25246607-25247490.bed)
Attempt

Content

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[2026-05-28T05:36:11.429776Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-28T05:36:11.433302Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-28T05:36:11.433323Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-28T05:36:11.433333Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-28T05:36:11.433341Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXOBe4bq'
[2026-05-28T05:36:11.433348Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-28T05:36:11.433357Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-28T05:36:11.433369Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-28T05:36:11.433376Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] [RunParameters] memMb: 386571
[2026-05-28T05:36:11.433383Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-28T05:36:11.433390Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-28T05:36:11.433399Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-28T05:36:11.433406Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-28T05:36:11.433413Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-28T05:36:11.433896Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-28T05:36:11.433963Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-28T05:36:11.443017Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-28T05:36:11.443728Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-28T05:36:11.443872Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-28T05:36:11.443994Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-28T05:36:11.444212Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.445624Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.445837Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.446189Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.446280Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.446570Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.446876Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.447347Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.447572Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.448719Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.449502Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.449937Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.450372Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-28T05:36:11.450442Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.450932Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.451078Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.451290Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.451416Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.451626Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.451745Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.452055Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.452258Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.452828Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.453329Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.453564Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.453689Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.453902Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.454024Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.454229Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.454356Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.454589Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.455414Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.456232Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.456371Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.456588Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.456713Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.456921Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.457043Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.457315Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.458009Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.458298Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.459019Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.459301Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.460041Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.460339Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.461090Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.461467Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.462272Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.463213Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.463413Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.464367Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.465092Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.465330Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.465473Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.465708Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.465842Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.487667Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.487893Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.488838Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.489139Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.490141Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.491181Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.491394Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.493328Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.493474Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:11.493563Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-28T05:36:11.494582Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.495546Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.495960Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.496760Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.498832Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.499595Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.501324Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.501885Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.502490Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.506711Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-05-28T05:36:11.508108Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0004] Task initiated on local node
[2026-05-28T05:36:11.508660Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-05-28T05:36:11.514029Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0006] Task initiated on local node
[2026-05-28T05:36:11.515355Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0000] Task initiated on local node
[2026-05-28T05:36:11.515459Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-05-28T05:36:11.516260Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0001] Task initiated on local node
[2026-05-28T05:36:11.619462Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.619547Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.620536Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.620977Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:11.625532Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0000] Task initiated on local node
[2026-05-28T05:36:11.627158Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0004] Task initiated on local node
[2026-05-28T05:36:13.139740Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.140729Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.143794Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0005] Task initiated on local node
[2026-05-28T05:36:13.355502Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.356525Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.360177Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0003] Task initiated on local node
[2026-05-28T05:36:13.521647Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.522697Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.525944Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0006] Task initiated on local node
[2026-05-28T05:36:13.587143Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.588183Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.591553Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0001] Task initiated on local node
[2026-05-28T05:36:13.652593Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.653623Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.656790Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-05-28T05:36:13.717970Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.718977Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.722263Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-05-28T05:36:14.786213Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.787335Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.790888Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-05-28T05:36:14.952010Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.953095Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.956733Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0001] Task initiated on local node
[2026-05-28T05:36:15.117640Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.118548Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.121904Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-05-28T05:36:15.182725Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.184062Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.187337Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0000] Task initiated on local node
[2026-05-28T05:36:15.849938Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.850973Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.854117Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-05-28T05:36:15.915202Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.916216Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.919321Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-05-28T05:36:16.030669Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.031526Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.035352Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0003] Task initiated on local node
[2026-05-28T05:36:16.146393Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.147318Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.150604Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0003] Task initiated on local node
[2026-05-28T05:36:16.211695Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.212580Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.215934Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-05-28T05:36:16.678345Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.679232Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.682574Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-05-28T05:36:16.780682Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0002] Task initiated on local node
[2026-05-28T05:36:16.793990Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.794071Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.794132Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.794950Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.795436Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.795762Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.800263Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-05-28T05:36:16.800519Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0002] Task initiated on local node
[2026-05-28T05:36:16.801809Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0001] Task initiated on local node
[2026-05-28T05:36:16.861231Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.861347Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.862149Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.862519Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.866300Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0004] Task initiated on local node
[2026-05-28T05:36:16.867659Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0004] Task initiated on local node
[2026-05-28T05:36:16.927484Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.928355Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.931978Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0004] Task initiated on local node
[2026-05-28T05:36:16.993133Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.993956Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.996973Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0005] Task initiated on local node
[2026-05-28T05:36:17.108291Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.109061Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.112700Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0002] Task initiated on local node
[2026-05-28T05:36:17.274039Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.274895Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.278162Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0000] Task initiated on local node
[2026-05-28T05:36:17.339395Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.340235Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.343683Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0005] Task initiated on local node
[2026-05-28T05:36:17.404708Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.405610Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.408988Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0002] Task initiated on local node
[2026-05-28T05:36:17.520422Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.521262Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.524547Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0002] Task initiated on local node
[2026-05-28T05:36:17.585723Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.586597Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.589886Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_015_chr16_0000] Task initiated on local node
[2026-05-28T05:36:17.650950Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.651763Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.654777Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-05-28T05:36:17.716147Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.716258Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.716954Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.717339Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.720338Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0000] Task initiated on local node
[2026-05-28T05:36:17.721160Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0001] Task initiated on local node
[2026-05-28T05:36:17.781895Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.782015Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.782725Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.783118Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.786977Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-05-28T05:36:17.788388Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0003] Task initiated on local node
[2026-05-28T05:36:17.847845Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.848592Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.851667Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0003] Task initiated on local node
[2026-05-28T05:36:17.912898Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.912992Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.913660Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.914051Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.917635Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-05-28T05:36:17.963248Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0000] Task initiated on local node
[2026-05-28T05:36:17.979540Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.979651Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.980372Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.983799Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0006] Task initiated on local node
[2026-05-28T05:36:18.445790Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.446544Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.449967Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-05-28T05:36:18.510867Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.926037Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.926686Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.929950Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0005] Task initiated on local node
[2026-05-28T05:36:18.990981Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.606260Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.606843Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.610257Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0004] Task initiated on local node
[2026-05-28T05:36:19.721116Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.935760Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.936365Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.939055Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0002] Task initiated on local node
[2026-05-28T05:36:20.000391Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.114842Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.115510Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.118908Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0001] Task initiated on local node
[2026-05-28T05:36:20.180078Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.149265Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.149857Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.152633Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0006] Task initiated on local node
[2026-05-28T05:36:22.214163Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.531666Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.532619Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.535829Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0003] Task initiated on local node
[2026-05-28T05:36:23.597009Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.597557Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.597850Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.598328Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.598772Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.603721Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-28T05:36:23.605400Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-28T05:36:23.606458Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-28T05:36:23.664644Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.664764Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.664815Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.665275Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.665848Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.669169Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-28T05:36:23.670137Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-28T05:36:23.730347Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.730478Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.730881Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.733842Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-28T05:36:23.795168Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.414803Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-28T05:36:44.553143Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-28T05:36:44.553143Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] 
[2026-05-28T05:36:44.553143Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-28T05:36:44.553254Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] 
[2026-05-28T05:36:44.553268Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-28T05:36:44.553280Z] [nf-45261a047028d4af4c7e6ca8a8d2ba00-27403-wxt5t] [714_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec