File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c6/5ce3415839a3ce82fc25624d8ba2be/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zfas7tv1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:41:12,992 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:41:13,799 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:41:13,972 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:41:14,983 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:41:15,058 - cnv_pipe.batch.run_model - INFO - Processing cluster 1057 with 185 probes
2026-05-28 05:41:15,524 - cnv_pipe.batch.run_model.cluster1057 - INFO - Child process started for cluster 1057 with 185 probes
2026-05-28 05:42:10,864 - cnv_pipe.batch.run_model.cluster1057 - INFO - Child process finished cluster 1057. Wrote cluster_1057_samples.csv and cluster_1057_params.csv
2026-05-28 05:42:10,865 - cnv_pipe.batch.run_model - INFO - Cluster 1057 finished in 55.81 seconds. Status: SUCCESS