File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/4327e40f24a3738d01f02e451189c8/.command.log
Size
89.4 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr12_102480219-102480663.bed)
Attempt

Content

View in new tab 
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/4327e40f24a3738d01f02e451189c8/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/4327e40f24a3738d01f02e451189c8/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/fd07f3bccb2b3e7b5521fe26c79365/Sig_18_Blood.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/16/fd07f3bccb2b3e7b5521fe26c79365/Sig_18_Blood.recalibrated.bam
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-05-28T05:36:17.956678Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-28T05:36:17.957383Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-28T05:36:17.957394Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-28T05:36:17.957399Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-28T05:36:17.957403Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXomBH4w'
[2026-05-28T05:36:17.957407Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-28T05:36:17.957412Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-28T05:36:17.957416Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-28T05:36:17.957420Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-28T05:36:17.957423Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-28T05:36:17.957427Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-28T05:36:17.957430Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-28T05:36:17.957434Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-28T05:36:17.957438Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-28T05:36:17.958043Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-28T05:36:17.958169Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-28T05:36:17.964132Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-28T05:36:17.964827Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-28T05:36:17.965050Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-28T05:36:17.965272Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-28T05:36:17.965504Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.966506Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.966607Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.966758Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.967180Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.967273Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.967443Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.967917Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.968223Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.970557Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.971005Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-28T05:36:17.971094Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.971421Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.971579Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.971698Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.971764Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.971880Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.971944Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.972057Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.972121Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.972352Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.972421Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.972534Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.972796Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.973203Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.973270Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.973392Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.973459Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.973568Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.973631Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.973737Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.973813Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.973926Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.973985Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.974103Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.974189Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.974475Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.974829Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.974945Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.975004Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.975114Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.975175Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.975290Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.975352Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.975458Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.975521Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.975634Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.975748Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.975900Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.976101Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.976612Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.976681Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.976789Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.976850Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.976958Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.977022Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.977136Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.977202Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.977309Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.977371Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.977480Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.977539Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.977817Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.978233Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.978347Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.978417Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.978526Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.978587Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.978693Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.978756Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.978864Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.978927Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.979034Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.979099Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.980623Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.981244Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.981386Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.981459Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.981569Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.981636Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.981748Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.981810Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.981924Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.981986Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.982095Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.982167Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.982278Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.982410Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.982787Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.983436Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.983555Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.983623Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.983731Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.983795Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.983908Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.984012Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.984124Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:17.984202Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:18.000865Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:18.001543Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:18.001631Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.001949Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-28T05:36:18.003172Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.003597Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.003989Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:18.004310Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.004804Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:18.005319Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.006190Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.006645Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:18.007189Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.008030Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.008540Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:18.009809Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.012507Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-05-28T05:36:18.013407Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-28T05:36:18.017629Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-05-28T05:36:18.022473Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-05-28T05:36:18.024131Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-05-28T05:36:18.025685Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-05-28T05:36:18.028772Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-05-28T05:36:18.032803Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-05-28T05:36:18.034271Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:18.034823Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-05-28T05:36:18.034909Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-28T05:36:18.149854Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.149976Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.150004Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.150975Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.151297Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.151765Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.156656Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-05-28T05:36:18.157827Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-05-28T05:36:18.159141Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-05-28T05:36:18.318840Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.319978Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.323235Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-05-28T05:36:18.735345Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.736765Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.739652Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-05-28T05:36:18.769193Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.770917Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.774239Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-05-28T05:36:19.136236Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.137299Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.140233Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-05-28T05:36:19.251835Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.253006Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.255929Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-05-28T05:36:19.285345Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.286397Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.289200Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-05-28T05:36:19.350717Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.351771Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.354515Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-05-28T05:36:19.616626Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.617684Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.620696Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-05-28T05:36:19.650020Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.651024Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.653816Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-05-28T05:36:19.715276Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.716812Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.717249Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.718865Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.721733Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-05-28T05:36:19.722612Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-05-28T05:36:19.750944Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.752452Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.755444Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-05-28T05:36:19.816625Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.818074Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.820962Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-05-28T05:36:19.882349Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.882464Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.883864Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.884378Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.887895Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-05-28T05:36:19.888556Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-05-28T05:36:19.916873Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.918197Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.921094Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-05-28T05:36:19.982393Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.983878Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.986799Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-05-28T05:36:20.015937Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.017428Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.020339Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-05-28T05:36:20.081546Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.081662Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.083091Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.083424Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.086212Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-05-28T05:36:20.087211Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-05-28T05:36:20.115597Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.116862Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.119691Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-05-28T05:36:20.124663Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.126038Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.128567Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-05-28T05:36:20.158009Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.159239Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.161986Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-05-28T05:36:20.191368Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.192638Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.195319Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-05-28T05:36:20.224789Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.226020Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.228839Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-05-28T05:36:20.290384Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.291615Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.294340Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-05-28T05:36:20.323724Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.324949Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.327830Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-05-28T05:36:20.357127Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.358389Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.361088Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-05-28T05:36:20.422573Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.422740Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.423932Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.424441Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.427185Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-05-28T05:36:20.428362Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-05-28T05:36:20.456586Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.457711Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.460311Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-05-28T05:36:20.521833Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.523253Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.526194Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-05-28T05:36:20.555419Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.556691Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.559564Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-05-28T05:36:20.621035Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.622249Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.625490Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-05-28T05:36:20.654726Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.655918Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.658886Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-05-28T05:36:20.688005Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.689190Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.691907Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-05-28T05:36:20.721107Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.721212Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.722285Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.722623Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.725723Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-05-28T05:36:20.726764Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-05-28T05:36:20.754753Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.755762Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.758383Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-05-28T05:36:20.870064Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.871193Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.874076Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-05-28T05:36:20.887247Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.888314Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.890701Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-05-28T05:36:20.920290Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.921425Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.924244Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-05-28T05:36:20.953586Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.954696Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.957637Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-05-28T05:36:20.986842Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.987958Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.990805Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-05-28T05:36:21.353088Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.354314Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.357560Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-05-28T05:36:21.418744Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.419931Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.422716Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-05-28T05:36:21.452053Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.453255Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.456110Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-05-28T05:36:21.517530Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.517656Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.518663Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.519094Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.522080Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-05-28T05:36:21.551925Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-05-28T05:36:21.583412Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.583544Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.584678Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.585146Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.588547Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-05-28T05:36:21.649949Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.650936Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.653804Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-05-28T05:36:21.682943Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.683989Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.686500Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-05-28T05:36:21.748159Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.749230Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.752074Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-05-28T05:36:21.813545Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.814640Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.818062Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-05-28T05:36:21.879075Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.880089Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.883308Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-05-28T05:36:22.094737Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.094830Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.095740Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.096271Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.099130Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-05-28T05:36:22.129040Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-05-28T05:36:22.131207Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-05-28T05:36:22.161022Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.161120Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.161157Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.161188Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.162109Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.162464Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.163061Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.163623Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.166480Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-05-28T05:36:22.167703Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-05-28T05:36:22.170129Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-05-28T05:36:22.171784Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-05-28T05:36:22.197482Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.197757Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.197807Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.198642Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.198945Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.199403Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.202158Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-05-28T05:36:22.205250Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-05-28T05:36:22.207155Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-05-28T05:36:22.269131Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.270336Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.272223Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.273271Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.273614Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-05-28T05:36:22.275879Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-05-28T05:36:22.305227Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.306424Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.306814Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.307887Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.311129Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-05-28T05:36:22.522898Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.523764Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.526856Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-05-28T05:36:22.588123Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.589076Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.592230Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-05-28T05:36:22.653441Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.654370Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.657534Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-05-28T05:36:22.768921Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.769869Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.772815Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-05-28T05:36:22.802076Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.802964Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.806207Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-05-28T05:36:22.835115Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.835963Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.838878Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-05-28T05:36:22.868136Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.868259Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.869073Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.869378Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.872313Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-05-28T05:36:22.873053Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-05-28T05:36:22.933620Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.933730Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.934510Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.934809Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.938337Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-05-28T05:36:22.939678Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-05-28T05:36:22.967389Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.999482Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.000163Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.003361Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-05-28T05:36:23.064571Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.780600Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.781332Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.784622Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-05-28T05:36:23.845898Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.878104Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.878775Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.881570Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-05-28T05:36:23.910819Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.025205Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.025899Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.028900Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-05-28T05:36:24.033947Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.034614Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.037028Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-05-28T05:36:24.066547Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.066620Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.146430Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-05-28T05:36:24.180902Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.180979Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.181542Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.182081Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.184860Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-05-28T05:36:24.185411Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-05-28T05:36:24.214097Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.214172Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.214607Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.214761Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.214980Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.215249Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.218942Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-28T05:36:24.220042Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-28T05:36:24.220991Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-28T05:36:24.248405Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.248479Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.248507Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.248757Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.249186Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.251427Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-28T05:36:24.252276Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-28T05:36:24.281209Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.281279Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.281503Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.283676Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-28T05:36:24.313400Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.585914Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-28T05:36:36.846037Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-28T05:36:36.846037Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] 
[2026-05-28T05:36:36.846037Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-28T05:36:36.846125Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] 
[2026-05-28T05:36:36.846133Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-28T05:36:36.846142Z] [nf-774327e40f24a3738d01f02e451189c8-01028-xx787] [587_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec