[2026-05-28T05:36:13.773442Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-28T05:36:13.774011Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-28T05:36:13.774023Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-28T05:36:13.774028Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-28T05:36:13.774032Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXqKYNnu'
[2026-05-28T05:36:13.774036Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-28T05:36:13.774041Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-28T05:36:13.774047Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-28T05:36:13.774058Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-28T05:36:13.774062Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-28T05:36:13.774065Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-28T05:36:13.774069Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-28T05:36:13.774073Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-28T05:36:13.774076Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-28T05:36:13.774396Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-28T05:36:13.774500Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-28T05:36:13.780348Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-28T05:36:13.781156Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-28T05:36:13.781373Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-28T05:36:13.781816Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-28T05:36:13.782193Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.782985Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.783083Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.783157Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.783599Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.783744Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.784044Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.784403Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.786227Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.786801Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.786954Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-28T05:36:13.787122Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.787274Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.787346Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.787465Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.787533Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.787651Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.787802Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.788158Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.788226Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.788416Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.788486Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.788602Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.788671Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.788786Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.788850Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.789012Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.789078Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.789278Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.789628Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.789900Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.790309Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.790429Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.790490Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.790600Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.790663Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.790774Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.790851Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.790962Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.791024Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.791135Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.791212Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.791556Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.791892Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.792197Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.792538Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.792659Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.792775Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.792891Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.792957Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.793066Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.793129Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.793241Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.793303Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.793411Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.793473Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.793832Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.794252Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.794363Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.794428Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.794544Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.794606Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.794721Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.794787Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.794894Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.794966Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.795076Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.795136Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.795591Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.796115Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.796369Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.796445Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.796559Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.796633Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.798328Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.798563Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.799248Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.799457Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.800125Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.800683Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.800805Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.800867Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.800984Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.801049Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.801159Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.801227Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.801337Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.801412Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.801522Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.801585Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.801707Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.801906Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.802563Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.802631Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.802743Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.802805Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.802922Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.802986Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.819081Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.819829Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.819976Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.820242Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.821343Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.821497Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.821613Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.822088Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.822215Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.822877Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.823176Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.823643Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.824311Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.825037Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.825659Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.826162Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:13.826409Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.827231Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-28T05:36:13.828050Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.834722Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-05-28T05:36:13.835336Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-05-28T05:36:13.839904Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-05-28T05:36:13.844081Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-05-28T05:36:13.844499Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-05-28T05:36:13.848295Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-05-28T05:36:13.849986Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-05-28T05:36:13.851422Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-05-28T05:36:13.915612Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.915784Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.917005Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.917615Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.918164Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.923315Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-05-28T05:36:13.924504Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-05-28T05:36:13.924622Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.928486Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-05-28T05:36:13.988729Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.989946Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:13.993644Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-05-28T05:36:14.104840Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.105991Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.109569Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-05-28T05:36:14.271047Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.272219Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.275462Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-05-28T05:36:14.988266Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.988347Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.989311Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.989655Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:14.992793Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-05-28T05:36:14.993845Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-05-28T05:36:15.054853Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.054943Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.055986Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.056236Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.059429Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-05-28T05:36:15.060361Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-05-28T05:36:15.121890Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.121982Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.122943Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.123403Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.126955Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-05-28T05:36:15.128285Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-05-28T05:36:15.188357Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.188420Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.189420Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.189859Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.193225Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-05-28T05:36:15.194184Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-05-28T05:36:15.254718Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.255710Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.258889Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-05-28T05:36:15.320051Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.321128Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.324872Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-05-28T05:36:15.537140Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.538201Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.541486Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-05-28T05:36:15.602459Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.602562Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.603589Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.603886Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.606866Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-05-28T05:36:15.607944Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-05-28T05:36:15.620063Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.621022Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.623667Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-05-28T05:36:15.653077Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.653198Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.654087Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.654337Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.657983Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-05-28T05:36:15.658835Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-05-28T05:36:15.969116Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.970121Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:15.973417Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-05-28T05:36:16.185124Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.186168Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.189200Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-05-28T05:36:16.350853Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.351904Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.355099Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-05-28T05:36:16.416474Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.417492Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.422427Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-05-28T05:36:16.481913Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.482972Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.485999Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-05-28T05:36:16.547801Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.548799Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.551749Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-05-28T05:36:16.613095Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.614069Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.617189Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-05-28T05:36:16.678725Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.679740Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.682870Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-05-28T05:36:16.744190Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.745208Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.748718Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-05-28T05:36:16.809643Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.810589Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.813787Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-05-28T05:36:16.842804Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.843763Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.846832Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-05-28T05:36:16.876224Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.877264Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.880520Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-05-28T05:36:16.880897Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.881557Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.884137Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-05-28T05:36:16.885176Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.885837Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.888495Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-05-28T05:36:16.893530Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.894293Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.896685Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-05-28T05:36:16.910186Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.910992Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.913733Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-05-28T05:36:16.914562Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.915291Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.918041Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-05-28T05:36:16.918846Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.919497Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.922161Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-05-28T05:36:16.935299Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.936127Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.938959Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-05-28T05:36:16.944125Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.944941Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.947612Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-05-28T05:36:16.948439Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.949091Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.951932Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-05-28T05:36:16.981009Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.981859Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.984605Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-05-28T05:36:17.013851Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.014726Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.017726Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-05-28T05:36:17.078933Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.079833Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.082547Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-05-28T05:36:17.111811Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.111938Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.112764Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.113071Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.116579Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-05-28T05:36:17.117415Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.117670Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-05-28T05:36:17.118491Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.121005Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-05-28T05:36:17.182612Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.183509Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.186267Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-05-28T05:36:17.247671Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.248516Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.251299Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-05-28T05:36:17.280730Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.281506Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.284298Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-05-28T05:36:17.297350Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.298154Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.301290Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-05-28T05:36:17.362629Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.362732Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.363523Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.363809Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.366693Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-05-28T05:36:17.367622Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-05-28T05:36:17.397029Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.397133Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.397903Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.398218Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.401224Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-05-28T05:36:17.402015Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-05-28T05:36:17.462694Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.462803Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.463575Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.463946Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.467282Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-05-28T05:36:17.468223Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-05-28T05:36:17.528460Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.529263Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.532042Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-05-28T05:36:17.593634Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.594423Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.597292Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-05-28T05:36:17.708875Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.709633Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.712487Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-05-28T05:36:17.774150Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.774947Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.777963Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-05-28T05:36:17.839366Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.840076Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.842897Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-05-28T05:36:18.004486Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.004600Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.005268Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.005565Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.009586Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-05-28T05:36:18.010595Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-05-28T05:36:18.070915Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.071680Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.074784Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-05-28T05:36:18.136058Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.136898Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.139602Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-05-28T05:36:18.168917Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.169610Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.172432Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-05-28T05:36:18.234201Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.234944Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.237716Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-05-28T05:36:18.299039Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.299780Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.302770Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-05-28T05:36:18.332146Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.332879Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.336003Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-05-28T05:36:18.397310Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.397418Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.398046Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.398359Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.401286Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-05-28T05:36:18.402014Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-05-28T05:36:18.430442Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.431079Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.433978Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-05-28T05:36:18.434633Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.435117Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.438045Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-05-28T05:36:18.467043Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.467682Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.470301Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-05-28T05:36:18.531751Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.531840Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.532424Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.532738Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.535409Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-05-28T05:36:18.536389Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-05-28T05:36:18.564891Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.565841Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.566095Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.568069Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.568526Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-05-28T05:36:18.570707Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-05-28T05:36:18.600312Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.600415Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.600946Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.603781Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-05-28T05:36:18.815706Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.816329Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.819253Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-05-28T05:36:18.848457Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.364196Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.364781Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.367897Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-05-28T05:36:19.397009Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.511564Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.512116Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.514784Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-05-28T05:36:19.544189Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.758776Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.759298Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.762013Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-05-28T05:36:19.791436Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.855623Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.856145Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.858811Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-05-28T05:36:19.888142Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.403952Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.404492Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.407482Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-05-28T05:36:20.468611Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.469354Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.469796Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.472371Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-05-28T05:36:20.501966Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.502261Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.502412Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.502713Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.503014Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.508023Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-28T05:36:20.509230Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-28T05:36:20.510206Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-28T05:36:20.535748Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.535905Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.536317Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.536702Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.537200Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.539802Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-28T05:36:20.565874Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-28T05:36:20.570161Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.570234Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.570438Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.572907Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-28T05:36:20.602405Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.375586Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-28T05:36:32.662266Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-28T05:36:32.662266Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] 
[2026-05-28T05:36:32.662266Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-28T05:36:32.662336Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] 
[2026-05-28T05:36:32.662343Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-28T05:36:32.662350Z] [nf-f3cdf2b2925174641d628a3c44fffb2c-6b803-q6glc] [581_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec