[2026-05-28T05:36:26.270182Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-28T05:36:26.271165Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-28T05:36:26.271189Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-28T05:36:26.271195Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-28T05:36:26.271199Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXcKPX9Z'
[2026-05-28T05:36:26.271203Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-28T05:36:26.271208Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-28T05:36:26.271212Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-28T05:36:26.271216Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] [RunParameters] memMb: 3096076
[2026-05-28T05:36:26.271219Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-28T05:36:26.271223Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-28T05:36:26.271226Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-28T05:36:26.271230Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-28T05:36:26.271234Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-28T05:36:26.271858Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-28T05:36:26.271922Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-28T05:36:26.277885Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-28T05:36:26.278631Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-28T05:36:26.279183Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-28T05:36:26.279399Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-28T05:36:26.279570Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.280317Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.280409Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.280481Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.280758Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.281424Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.281600Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.281762Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.282047Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.282470Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.282864Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.283501Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.285411Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.286052Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.286165Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-28T05:36:26.286328Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.286455Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.286519Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.286632Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.286694Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.286889Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.286997Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.287109Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.287358Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.287636Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.287699Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.287818Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.287881Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.287986Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.288050Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.288164Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.288271Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.288381Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.288445Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.288552Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.288749Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.289099Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.289162Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.289270Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.289335Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.289443Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.289502Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.289615Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.289681Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.289787Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.289847Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.289959Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.290069Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.290350Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.290741Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.291116Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.292025Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.292223Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.292298Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.292422Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.292492Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.292609Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.292674Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.292998Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.293501Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.293663Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.293726Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.293843Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.293906Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.294021Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.294093Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.294203Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.294263Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.294375Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.294499Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.294718Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.295195Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.295326Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.295403Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.296713Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.297308Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.298228Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.298342Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.298474Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.298544Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.298664Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.298727Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.298885Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.299214Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.299868Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.299940Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.300049Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.300135Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.300244Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.300306Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.300419Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.300522Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.300633Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.300694Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.300808Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.300927Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.301163Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.301851Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.317435Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.317839Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.318119Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.319014Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.319198Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.319532Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.319621Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.319829Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.320154Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.320416Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.320646Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.321062Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:26.321139Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.321347Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-28T05:36:26.322067Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.324881Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.325369Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-05-28T05:36:26.326366Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.331044Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.331573Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-05-28T05:36:26.332076Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-05-28T05:36:26.333889Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.335287Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-05-28T05:36:26.339443Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-05-28T05:36:26.342324Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-05-28T05:36:26.345337Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-05-28T05:36:26.347576Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-05-28T05:36:26.461572Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.461674Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.461703Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.461727Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.462690Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.463331Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.466050Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.466709Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.467254Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-05-28T05:36:26.470365Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-05-28T05:36:26.478127Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-05-28T05:36:26.478498Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-05-28T05:36:26.542032Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.542953Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.547501Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-05-28T05:36:26.560070Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.561111Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:26.565858Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-05-28T05:36:27.980758Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:27.980853Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:27.981840Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:27.982600Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:27.986146Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-05-28T05:36:27.987245Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-05-28T05:36:28.047647Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.048713Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.051968Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-05-28T05:36:28.113299Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.114407Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.118606Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-05-28T05:36:28.330038Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.331357Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.334721Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-05-28T05:36:28.395672Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.397081Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.401130Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-05-28T05:36:28.562077Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.563592Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.566739Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-05-28T05:36:28.627834Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.629315Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.632821Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-05-28T05:36:28.744023Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.745516Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.748630Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-05-28T05:36:28.809845Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.809931Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.811182Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.811896Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.815969Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-05-28T05:36:28.816536Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-05-28T05:36:28.876666Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.876760Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.878352Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.878734Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.882665Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-05-28T05:36:28.940046Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-05-28T05:36:28.943502Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.943572Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.944818Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.945358Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:28.948987Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-05-28T05:36:28.950171Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-05-28T05:36:29.010112Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.010205Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.011436Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.011898Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.015308Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-05-28T05:36:29.016608Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-05-28T05:36:29.076143Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.077320Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.080951Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-05-28T05:36:29.191650Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.193060Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.196226Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-05-28T05:36:29.307855Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.308809Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.311861Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-05-28T05:36:29.312772Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.313576Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.317076Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-05-28T05:36:29.345939Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.346877Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.350448Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-05-28T05:36:29.411550Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.412523Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.416048Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-05-28T05:36:29.828756Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.829732Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.832631Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-05-28T05:36:29.994417Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.995464Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:29.998869Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-05-28T05:36:30.060027Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.061015Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.064022Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-05-28T05:36:30.126657Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.127569Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.130459Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-05-28T05:36:30.191929Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.192907Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.196297Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-05-28T05:36:30.257327Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.258270Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.261544Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-05-28T05:36:30.322832Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.323760Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.326931Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-05-28T05:36:30.388142Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.389089Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.393363Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-05-28T05:36:30.504106Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.504232Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.505073Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.505850Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.509021Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-05-28T05:36:30.510225Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-05-28T05:36:30.571976Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.572084Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.572911Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.573258Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.577053Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-05-28T05:36:30.578143Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-05-28T05:36:30.589641Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.590504Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.593833Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-05-28T05:36:30.654880Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.654981Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.655784Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.656402Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.659735Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-05-28T05:36:30.660765Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-05-28T05:36:30.722255Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.722359Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.723147Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.723853Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.727256Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-05-28T05:36:30.728468Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-05-28T05:36:30.788654Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.788769Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.789571Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.791837Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.792444Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-05-28T05:36:30.795886Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-05-28T05:36:30.856848Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.857687Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.861206Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-05-28T05:36:30.923732Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.924564Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.927655Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-05-28T05:36:30.989389Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.990211Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:30.993635Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-05-28T05:36:31.155345Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.156160Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.159512Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-05-28T05:36:31.220763Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.221836Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.222104Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.224217Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.224542Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-05-28T05:36:31.227510Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-05-28T05:36:31.288758Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.288840Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.288872Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.289501Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.290217Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.290586Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.295162Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-05-28T05:36:31.296906Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-05-28T05:36:31.298194Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-05-28T05:36:31.404839Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.405631Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.408860Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-05-28T05:36:31.470423Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.471193Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.474789Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-05-28T05:36:31.536008Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.536102Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.536806Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.537436Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.540999Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-05-28T05:36:31.542191Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-05-28T05:36:31.602101Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.602222Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.602949Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.603565Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.607092Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-05-28T05:36:31.608535Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-05-28T05:36:31.669440Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.669557Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.670362Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.670992Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.673751Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-05-28T05:36:31.675125Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.675935Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-05-28T05:36:31.676038Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.678596Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-05-28T05:36:31.708195Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.708887Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.712661Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-05-28T05:36:31.741243Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.741949Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.745389Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-05-28T05:36:31.774464Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.775160Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.778159Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-05-28T05:36:31.779188Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.779741Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.782377Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-05-28T05:36:31.843949Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.844670Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.847263Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-05-28T05:36:31.908911Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.909625Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.912667Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-05-28T05:36:31.941938Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.942590Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.945823Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-05-28T05:36:31.950629Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.951211Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.953819Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-05-28T05:36:31.984381Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.985002Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.987970Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-05-28T05:36:31.989832Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.990390Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:31.993237Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-05-28T05:36:32.022725Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.023347Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.026414Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-05-28T05:36:32.027563Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.028093Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.030845Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-05-28T05:36:32.093799Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.094443Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.097662Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-05-28T05:36:32.158789Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.159481Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.162892Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-05-28T05:36:32.574969Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.575659Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.579047Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-05-28T05:36:32.640093Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.640729Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:32.643778Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-05-28T05:36:32.705243Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.170411Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.171007Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.173949Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-05-28T05:36:33.235588Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.267741Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.268345Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.271800Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-05-28T05:36:33.300699Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.301289Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.304691Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-05-28T05:36:33.305220Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.369412Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.369515Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.370013Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.373130Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-05-28T05:36:33.434465Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.599234Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.599796Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.602738Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-05-28T05:36:33.632345Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.632919Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.635295Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-05-28T05:36:33.636687Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:33.668641Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.484354Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.484892Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.487840Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-05-28T05:36:34.549255Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.549566Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.549709Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.550340Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.551483Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.554919Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-28T05:36:34.556564Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-28T05:36:34.582629Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-28T05:36:34.585318Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.585387Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.585598Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.585976Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.588665Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-28T05:36:34.589186Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.589662Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-28T05:36:34.620964Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.621032Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.621220Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:34.623575Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-28T05:36:34.685595Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:36.903603Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-28T05:36:45.159706Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-28T05:36:45.159706Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] 
[2026-05-28T05:36:45.159706Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-28T05:36:45.159768Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] 
[2026-05-28T05:36:45.159776Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-28T05:36:45.159782Z] [nf-19b85cc05e14f4a6c269988f242c02ef-8512a-w4nvb] [618_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec