cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_tissue.md.bam --algo AlignmentStat Sig_18_tissue.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo Sig_18_tissue.sentieon.insert_size_metrics --algo QualDistribution Sig_18_tissue.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle Sig_18_tissue.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle Sig_18_tissue.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:153000001, elapsed 0.0s, est remaining 0.5s, peak mem 81MB, user 0.1s, sys 0.3s, output queue size 18
progress 10% @chr2:79000001, elapsed 0.0s, est remaining 0.4s, peak mem 81MB, user 0.2s, sys 0.9s, output queue size 10
progress 15% @chr2:215000001, elapsed 0.1s, est remaining 0.4s, peak mem 81MB, user 0.3s, sys 1.6s, output queue size 20
progress 20% @chr3:138000001, elapsed 0.1s, est remaining 0.4s, peak mem 81MB, user 0.4s, sys 2.1s, output queue size 22
progress 25% @chr4:121000001, elapsed 0.1s, est remaining 0.3s, peak mem 81MB, user 0.5s, sys 2.6s, output queue size 19
progress 30% @chr5:96000001, elapsed 0.1s, est remaining 0.3s, peak mem 81MB, user 0.6s, sys 3.3s, output queue size 17
progress 35% @chr6:69000001, elapsed 0.2s, est remaining 0.3s, peak mem 81MB, user 0.7s, sys 3.8s, output queue size 25
progress 40% @chr7:59000001, elapsed 0.2s, est remaining 0.3s, peak mem 81MB, user 0.9s, sys 4.3s, output queue size 14
progress 45% @chr8:37000001, elapsed 0.2s, est remaining 0.3s, peak mem 81MB, user 1.0s, sys 4.8s, output queue size 20
progress 50% @chr9:78000001, elapsed 0.2s, est remaining 0.2s, peak mem 81MB, user 1.1s, sys 5.5s, output queue size 18
progress 55% @chr10:101000001, elapsed 0.3s, est remaining 0.2s, peak mem 81MB, user 1.2s, sys 6.1s, output queue size 20
progress 60% @chr11:130000001, elapsed 0.3s, est remaining 0.2s, peak mem 81MB, user 1.3s, sys 6.6s, output queue size 16
progress 65% @chr13:25000001, elapsed 0.3s, est remaining 0.2s, peak mem 81MB, user 1.4s, sys 7.2s, output queue size 17
progress 70% @chr14:68000001, elapsed 0.3s, est remaining 0.1s, peak mem 81MB, user 1.5s, sys 7.8s, output queue size 15
progress 75% @chr16:22000001, elapsed 0.3s, est remaining 0.1s, peak mem 81MB, user 1.6s, sys 8.4s, output queue size 18
progress 80% @chr18:5000001, elapsed 0.4s, est remaining 0.1s, peak mem 81MB, user 1.7s, sys 9.0s, output queue size 16
progress 85% @chr20:15000001, elapsed 0.4s, est remaining 0.1s, peak mem 81MB, user 1.8s, sys 9.5s, output queue size 17
progress 90% @chrX:45000001, elapsed 0.5s, est remaining 0.1s, peak mem 106MB, user 2.2s, sys 9.9s, output queue size 114
progress 95% @chrY:45000001, elapsed 0.5s, est remaining 0.0s, peak mem 123MB, user 2.7s, sys 10.1s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.2s, est remaining 0.0s, peak mem 153MB, user 6.2s, sys 10.4s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 50047074
reads: 1001838
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.335 user 4.406 sys 7.066 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.002 user 0.001 sys 1.265 real
idle: 75 calls 0.020 user 0.022 sys 52.363 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 162291712 mem 6.432 user 10.934 sys 2.309 real