File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/74/3dc3236f1b2b7ea4799bd517293bc0/.command.err
Size
100.8 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_1;chr6_138229684-138229952.bed)
Attempt

Content

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[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX549mrA/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX549mrA/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXX549mrA/chr6_138229684-138229952.bed.gz.tbi
[2026-05-28T05:36:16.633836Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Initiating pyFlow run
[2026-05-28T05:36:16.634727Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-05-28T05:36:16.634740Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-05-28T05:36:16.634744Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-05-28T05:36:16.634748Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX549mrA'
[2026-05-28T05:36:16.634752Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-05-28T05:36:16.634758Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] [RunParameters] mode: local
[2026-05-28T05:36:16.634761Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-05-28T05:36:16.634765Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-05-28T05:36:16.634769Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-05-28T05:36:16.634773Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-05-28T05:36:16.634776Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-05-28T05:36:16.634792Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-05-28T05:36:16.634797Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-05-28T05:36:16.635257Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-05-28T05:36:16.635366Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-05-28T05:36:16.641799Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-05-28T05:36:16.642530Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-05-28T05:36:16.642732Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-05-28T05:36:16.642992Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-05-28T05:36:16.643208Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.643714Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.643802Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.643875Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.643990Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.644057Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.644175Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.644238Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.644380Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.644624Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.645056Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.645202Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.645700Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.646230Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.646344Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.648403Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.648583Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-05-28T05:36:16.648929Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.649201Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.649463Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.649679Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.649753Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.649869Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.649936Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.650046Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.650108Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.650220Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.650284Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.650393Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.650468Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.650751Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.651122Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.651259Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.651322Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.651434Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.651499Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.651608Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.651679Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.651791Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.651858Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.651971Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.652033Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.652172Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.652324Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.652786Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.652851Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.652966Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.653101Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.653218Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.653286Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.653395Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.653459Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.653572Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.653633Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.654028Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.654494Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.654699Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.654805Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.654941Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.655014Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.655140Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.655205Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.655331Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.655404Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.655660Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.656133Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.656249Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.656315Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.656432Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.656504Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.656620Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.656685Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.656797Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.656862Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.658400Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.658635Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.659475Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.660029Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.660147Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.660216Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.660329Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.660392Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.660505Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.660572Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.660683Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.660749Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.660891Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.660970Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.661251Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.661824Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.661947Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.662013Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.662120Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.662185Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.662297Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.662361Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.662478Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.662540Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.662654Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.662720Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.662908Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.663066Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.664190Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.664325Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.664464Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.664543Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.664657Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.664726Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.664842Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.664947Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.667842Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.668428Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.668731Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.668810Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.683205Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.684062Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.684166Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.685248Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.685494Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.685758Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.685842Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.686096Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.686351Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.686658Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.687100Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.687857Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.688688Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.689131Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-05-28T05:36:16.689560Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-05-28T05:36:16.689903Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.690632Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.692073Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.693169Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.697358Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-05-28T05:36:16.702764Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-05-28T05:36:16.706238Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-05-28T05:36:16.709537Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-28T05:36:16.712232Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-05-28T05:36:16.759996Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-05-28T05:36:16.776021Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.777193Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.780690Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-05-28T05:36:16.785605Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.786691Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.790429Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-05-28T05:36:16.814287Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-05-28T05:36:16.819237Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.820465Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.823586Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-05-28T05:36:16.884833Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.886145Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:16.889793Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-05-28T05:36:17.552656Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.553960Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.556955Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-05-28T05:36:17.648636Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-05-28T05:36:17.668613Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.669851Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.672795Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-05-28T05:36:17.734183Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.735394Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.738445Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-05-28T05:36:17.799923Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.801153Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.804023Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-05-28T05:36:17.833501Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.834756Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.837716Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-05-28T05:36:17.949475Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.950827Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:17.954179Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-05-28T05:36:18.015651Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.016839Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.020004Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-05-28T05:36:18.049235Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.050509Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.053783Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-05-28T05:36:18.083177Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.084354Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.087155Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-05-28T05:36:18.148437Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.149534Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.152910Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-05-28T05:36:18.213953Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.215517Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.218493Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-05-28T05:36:18.223300Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.224360Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.227507Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-05-28T05:36:18.256418Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.257572Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.260450Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-05-28T05:36:18.266575Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.267642Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.270520Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-05-28T05:36:18.299766Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.299857Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.300902Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.301528Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.303941Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-05-28T05:36:18.306221Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-05-28T05:36:18.335341Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.335434Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.336454Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.336750Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.340084Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-05-28T05:36:18.341166Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-05-28T05:36:18.369613Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.370707Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.373388Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-05-28T05:36:18.402946Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.403991Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.406808Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-05-28T05:36:18.618861Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.620064Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.623054Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-05-28T05:36:18.684715Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.685942Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.688553Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-05-28T05:36:18.717872Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.719011Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:18.721757Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-05-28T05:36:19.134256Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.134364Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.135471Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.135950Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.139214Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-05-28T05:36:19.140337Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-05-28T05:36:19.169906Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.170956Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.173573Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-05-28T05:36:19.187090Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.188075Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.190838Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-05-28T05:36:19.302354Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.303468Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.306034Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-05-28T05:36:19.367609Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.368789Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.371470Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-05-28T05:36:19.483578Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.484545Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.487114Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-05-28T05:36:19.492289Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.493211Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.495759Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-05-28T05:36:19.525167Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.525256Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.526181Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.526443Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.529533Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-05-28T05:36:19.530679Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-05-28T05:36:19.559000Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.559969Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.562810Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-05-28T05:36:19.575850Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.576814Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.579300Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-05-28T05:36:19.608903Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.608976Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.609979Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.610223Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.613250Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-05-28T05:36:19.616004Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-05-28T05:36:19.646898Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.647773Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.650416Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-05-28T05:36:19.680062Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.681062Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.683777Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-05-28T05:36:19.713253Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.714131Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.716736Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-05-28T05:36:19.746070Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.747036Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.749700Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-05-28T05:36:19.779131Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.780382Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.783169Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-05-28T05:36:19.844502Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.845904Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.848558Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-05-28T05:36:19.877952Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.879187Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.882046Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-05-28T05:36:19.911161Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.912661Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.915217Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-05-28T05:36:19.944638Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.945839Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.948606Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-05-28T05:36:19.977954Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.979407Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:19.982409Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-28T05:36:20.093783Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.095033Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.098056Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-05-28T05:36:20.127195Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.128418Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.131412Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-05-28T05:36:20.136710Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.138074Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.141047Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-05-28T05:36:20.170024Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.170119Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.171266Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.171830Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.175356Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-05-28T05:36:20.176214Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-05-28T05:36:20.486687Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.487947Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.491307Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-05-28T05:36:20.602673Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.604161Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.604826Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.606198Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.609217Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-05-28T05:36:20.610171Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-05-28T05:36:20.639593Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.641536Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.642155Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.643544Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.646610Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-05-28T05:36:20.647793Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-05-28T05:36:20.708218Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.709337Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.712622Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-05-28T05:36:20.773747Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.774662Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.777623Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-05-28T05:36:20.839007Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.839089Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.839925Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.840665Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.843444Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-05-28T05:36:20.844767Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-05-28T05:36:20.906467Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.907411Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.909945Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-05-28T05:36:20.939278Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.940093Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.942971Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-05-28T05:36:20.956252Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.957042Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:20.959779Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-05-28T05:36:21.321636Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.322509Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.325588Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-05-28T05:36:21.356036Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.356782Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.359466Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-05-28T05:36:21.388970Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.389760Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.392510Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-05-28T05:36:21.421726Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.422541Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.425045Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-05-28T05:36:21.454538Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.455479Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.458103Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-05-28T05:36:21.569728Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.570542Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.573302Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-05-28T05:36:21.602631Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.603424Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.606910Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-05-28T05:36:21.768811Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.769587Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.772514Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-05-28T05:36:21.884006Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.884812Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:21.888026Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-05-28T05:36:22.250507Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.251543Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.254180Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-05-28T05:36:22.283490Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.284601Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.287170Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-05-28T05:36:22.348960Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.349044Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.349682Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.350554Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.353361Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-05-28T05:36:22.354699Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-05-28T05:36:22.359953Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.360598Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.363520Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-05-28T05:36:22.424833Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.425556Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.428246Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-05-28T05:36:22.457614Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.458348Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.460936Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-05-28T05:36:22.490393Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.491135Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.493609Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-05-28T05:36:22.555609Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.556346Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.559367Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-05-28T05:36:22.588443Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.589172Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.591925Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-05-28T05:36:22.621178Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.621827Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.625003Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-05-28T05:36:22.653948Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.654618Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.657592Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-05-28T05:36:22.719286Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.719994Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.723392Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-05-28T05:36:22.752094Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.752782Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.755637Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-05-28T05:36:22.785079Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.785755Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.788517Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-05-28T05:36:22.817765Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.818488Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.821701Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-05-28T05:36:22.882919Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.883570Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.886321Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-05-28T05:36:22.899629Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.900255Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.903105Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-05-28T05:36:22.917744Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.918338Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.921176Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-05-28T05:36:22.934331Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.934924Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.937666Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-05-28T05:36:22.951008Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.951581Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:22.954120Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-05-28T05:36:22.983892Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.048196Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.048799Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.051359Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-05-28T05:36:23.081127Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.345930Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.346529Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.349433Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-05-28T05:36:23.411029Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.625658Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.625744Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.626253Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.626513Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.629420Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-05-28T05:36:23.630731Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-05-28T05:36:23.658684Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.660291Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.676097Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.676610Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-05-28T05:36:23.679530Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-05-28T05:36:23.708574Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.274242Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.274826Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.277429Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-05-28T05:36:24.306884Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.371103Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.371745Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.374655Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-05-28T05:36:24.403711Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.404119Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.404302Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.404731Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.405134Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.408742Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-05-28T05:36:24.410237Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-05-28T05:36:24.411379Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-05-28T05:36:24.437879Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.437958Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.437984Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.438228Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.438738Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.441591Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-05-28T05:36:24.442297Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-05-28T05:36:24.471756Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.471836Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.472090Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-05-28T05:36:24.474304Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-05-28T05:36:24.504056Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-05-28T05:36:27.272725Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-05-28T05:36:35.523165Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-05-28T05:36:35.523165Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] 
[2026-05-28T05:36:35.523165Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-05-28T05:36:35.523269Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] 
[2026-05-28T05:36:35.523277Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-05-28T05:36:35.523284Z] [nf-743dc3236f1b2b7ea4799bd517293bc0-0edcf-gwxmj] [579_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec