File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/db617e53b4fa804c337f093c6b8445/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-esyt4jc_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-05-28 05:40:33,397 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-05-28 05:40:34,270 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-05-28 05:40:34,445 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-05-28 05:40:35,466 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-05-28 05:40:35,621 - cnv_pipe.batch.run_model - INFO - Processing cluster 866 with 180 probes
2026-05-28 05:40:35,999 - cnv_pipe.batch.run_model.cluster866 - INFO - Child process started for cluster 866 with 180 probes
2026-05-28 05:41:33,256 - cnv_pipe.batch.run_model.cluster866 - INFO - Child process finished cluster 866. Wrote cluster_866_samples.csv and cluster_866_params.csv
2026-05-28 05:41:33,257 - cnv_pipe.batch.run_model - INFO - Cluster 866 finished in 57.64 seconds. Status: SUCCESS