File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/0c3c75889970009a91d6367052d388/.command.err
Size
68.3 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr10_74133927-74134264.bed)
Attempt

Content

View in new tab 
[2026-06-01T21:52:00.072465Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-01T21:52:00.073279Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-01T21:52:00.073298Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-01T21:52:00.073306Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-01T21:52:00.073314Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXUJHfQA'
[2026-06-01T21:52:00.073320Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-01T21:52:00.073328Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-01T21:52:00.073332Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-01T21:52:00.073336Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-01T21:52:00.073340Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-01T21:52:00.073343Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-01T21:52:00.073347Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-01T21:52:00.073350Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-01T21:52:00.073354Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-01T21:52:00.074051Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-01T21:52:00.074179Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-01T21:52:00.080519Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-01T21:52:00.081688Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-01T21:52:00.082020Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-01T21:52:00.082345Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-01T21:52:00.082935Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.083837Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.083949Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.084485Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.084635Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.085344Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.085758Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.086088Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.088615Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.089011Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-01T21:52:00.089511Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.089802Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.090224Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.090471Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.090601Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.090672Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.090793Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.090860Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.090981Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.091044Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.091244Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.091313Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.091429Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.091545Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.091944Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.092216Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.092371Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.092438Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.092551Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.092618Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.092739Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.092820Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.092936Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.092998Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.093109Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.093176Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.093546Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.093878Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.094010Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.094075Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.094193Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.094255Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.094377Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.094450Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.094565Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.094629Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.094744Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.094861Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.095284Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.095747Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.096378Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.096836Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.096953Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.097020Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.097140Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.097201Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.097318Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.097385Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.097500Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.097601Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.097718Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.097780Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.098156Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.098627Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.098743Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.098814Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.098928Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.098995Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.099113Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.099182Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.099294Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.099363Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.099472Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.099538Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.119271Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.119685Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.119882Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.120704Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.120784Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.120880Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.120947Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.121068Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.121146Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:52:00.121200Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-01T21:52:00.125383Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.126062Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.126425Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.126756Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.127560Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.128568Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.129420Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.130408Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.131560Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.138861Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-01T21:52:00.143752Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0003] Task initiated on local node
[2026-06-01T21:52:00.147307Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-01T21:52:00.148269Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0011] Task initiated on local node
[2026-06-01T21:52:00.153244Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0009] Task initiated on local node
[2026-06-01T21:52:00.155665Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-01T21:52:00.156017Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0003] Task initiated on local node
[2026-06-01T21:52:00.157224Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0004] Task initiated on local node
[2026-06-01T21:52:00.302801Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.302954Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.303837Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.304222Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.310754Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-01T21:52:00.311357Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0001] Task initiated on local node
[2026-06-01T21:52:00.422133Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.423057Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.426768Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0006] Task initiated on local node
[2026-06-01T21:52:01.090055Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.091157Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.094808Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-01T21:52:01.156034Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.156984Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.161273Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-01T21:52:01.221745Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.222953Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.226577Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-01T21:52:01.287934Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.289118Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.293527Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0008] Task initiated on local node
[2026-06-01T21:52:01.404435Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.405402Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.409205Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0006] Task initiated on local node
[2026-06-01T21:52:01.570892Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.571854Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.575376Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0006] Task initiated on local node
[2026-06-01T21:52:01.636661Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.637522Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.641510Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-01T21:52:01.752801Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.753672Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.757889Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0001] Task initiated on local node
[2026-06-01T21:52:02.120390Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.121346Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.126088Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-01T21:52:02.187149Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.188136Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.192240Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-01T21:52:02.253480Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.254463Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.258060Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0009] Task initiated on local node
[2026-06-01T21:52:02.419907Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.420899Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.424923Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0009] Task initiated on local node
[2026-06-01T21:52:02.536183Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.537111Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.540862Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-01T21:52:02.702729Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.703607Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.707916Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-01T21:52:02.768531Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.769434Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.773786Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0001] Task initiated on local node
[2026-06-01T21:52:02.834900Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.835726Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.840396Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0010] Task initiated on local node
[2026-06-01T21:52:03.302886Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.303812Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.307845Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0011] Task initiated on local node
[2026-06-01T21:52:03.368945Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.369900Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.373792Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0010] Task initiated on local node
[2026-06-01T21:52:03.402884Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.403726Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.407343Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0000] Task initiated on local node
[2026-06-01T21:52:04.071112Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.071982Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.076096Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-01T21:52:04.137267Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.138142Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.142288Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0002] Task initiated on local node
[2026-06-01T21:52:04.154963Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.155719Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.160788Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-01T21:52:04.171822Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.172622Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.176143Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-01T21:52:04.237487Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.237593Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.237621Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.238445Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.238924Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.239785Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.244606Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0001] Task initiated on local node
[2026-06-01T21:52:04.248591Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0007] Task initiated on local node
[2026-06-01T21:52:04.250118Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-01T21:52:04.307210Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.308092Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.311963Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0009] Task initiated on local node
[2026-06-01T21:52:04.373025Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.373927Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.377379Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-01T21:52:04.588999Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.590001Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.593462Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0005] Task initiated on local node
[2026-06-01T21:52:05.056093Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.056985Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.061631Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0003] Task initiated on local node
[2026-06-01T21:52:05.122323Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.123116Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.127759Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-01T21:52:05.539947Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.540839Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.544691Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0008] Task initiated on local node
[2026-06-01T21:52:05.605942Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.606861Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.611262Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0005] Task initiated on local node
[2026-06-01T21:52:05.721935Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.722695Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.725898Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0002] Task initiated on local node
[2026-06-01T21:52:05.755072Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.755840Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.760288Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0008] Task initiated on local node
[2026-06-01T21:52:05.760750Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.761289Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.764471Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0007] Task initiated on local node
[2026-06-01T21:52:05.825595Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.826404Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.830066Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0000] Task initiated on local node
[2026-06-01T21:52:05.891030Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.891838Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.895270Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_009_chr10_0000] Task initiated on local node
[2026-06-01T21:52:05.956524Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.957320Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.961211Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0000] Task initiated on local node
[2026-06-01T21:52:06.022159Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.022940Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.026620Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0004] Task initiated on local node
[2026-06-01T21:52:06.087706Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.088552Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.092087Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0005] Task initiated on local node
[2026-06-01T21:52:06.121231Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.121991Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.125323Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-01T21:52:06.130210Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.130851Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.134397Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0011] Task initiated on local node
[2026-06-01T21:52:06.163125Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.163217Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.163774Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.164136Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.167509Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0003] Task initiated on local node
[2026-06-01T21:52:06.168875Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-01T21:52:06.228984Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.229080Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.229909Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.230305Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.234001Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0007] Task initiated on local node
[2026-06-01T21:52:06.235159Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0010] Task initiated on local node
[2026-06-01T21:52:06.295063Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.295798Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.299267Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0006] Task initiated on local node
[2026-06-01T21:52:06.360675Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.361375Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.364834Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_009_chr10_0004] Task initiated on local node
[2026-06-01T21:52:06.426287Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.426987Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.430671Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_009_chr10_0004] Task initiated on local node
[2026-06-01T21:52:06.491435Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_009_chr10_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.492140Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.495907Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-01T21:52:06.556616Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.557256Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.560639Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-01T21:52:06.621814Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.621915Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.621945Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.622550Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.622910Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.623242Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.627952Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0000] Task initiated on local node
[2026-06-01T21:52:06.628357Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-01T21:52:06.629327Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0010] Task initiated on local node
[2026-06-01T21:52:06.689268Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.689369Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.689409Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.690014Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.693442Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_010_chr11_0002] Task initiated on local node
[2026-06-01T21:52:07.055669Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.056282Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.059722Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0008] Task initiated on local node
[2026-06-01T21:52:07.121248Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.129128Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.129724Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.132964Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-01T21:52:07.194228Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.508999Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.509540Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.512806Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0007] Task initiated on local node
[2026-06-01T21:52:07.574354Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.638546Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.639097Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.642221Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0011] Task initiated on local node
[2026-06-01T21:52:07.703250Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.867671Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.868346Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.871905Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0005] Task initiated on local node
[2026-06-01T21:52:07.932695Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.147603Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.148111Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.151145Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_010_chr11_0002] Task initiated on local node
[2026-06-01T21:52:08.212542Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_010_chr11_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.212890Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.213062Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.213457Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.213928Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.218377Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-01T21:52:08.219569Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-01T21:52:08.220414Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-01T21:52:08.278246Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.278330Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.278354Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.278603Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.279045Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.282248Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-01T21:52:08.283307Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-01T21:52:08.311307Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.313144Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.313356Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.317485Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-01T21:52:08.345325Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:10.665138Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-01T21:52:18.961898Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-01T21:52:18.961898Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] 
[2026-06-01T21:52:18.961898Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-01T21:52:18.961993Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] 
[2026-06-01T21:52:18.962007Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-01T21:52:18.962016Z] [nf-360c3c75889970009a91d6367052d388-07a3e-q7b8c] [602_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec