Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz.tbi
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/244f866380d9112366f07421f73d58/.command.sh
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/a1c6d402d9a4ff79b37cba5f445f9c/Sig_18_tissue.recalibrated.bam
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/a1c6d402d9a4ff79b37cba5f445f9c/Sig_18_tissue.recalibrated.bam.bai
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/244f866380d9112366f07421f73d58/.command.run
==> STAGING COMPLETE (10 inputs)
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUdf6uB/chr4_22420786-22421189.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUdf6uB/chr4_22420786-22421189.bed.gz.tbi
Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:
/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUdf6uB/chr4_22420786-22421189.bed.gz.tbi
[2026-06-01T21:51:43.906863Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-01T21:51:43.907760Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-01T21:51:43.907771Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-01T21:51:43.907776Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-01T21:51:43.907780Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXUdf6uB'
[2026-06-01T21:51:43.907784Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-01T21:51:43.907789Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-01T21:51:43.907793Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-01T21:51:43.907806Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-01T21:51:43.907816Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-01T21:51:43.907826Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-01T21:51:43.907832Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-01T21:51:43.907841Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-01T21:51:43.907851Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-01T21:51:43.908440Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-01T21:51:43.908605Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-01T21:51:43.914546Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-01T21:51:43.915279Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-01T21:51:43.915488Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-01T21:51:43.915775Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-01T21:51:43.915956Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.916451Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.916542Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.916614Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.916765Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.916911Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.917311Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.917492Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.917570Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.917861Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.918398Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.920417Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.921030Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.921379Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-01T21:51:43.921578Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.921846Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.921964Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.922027Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.922150Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.922234Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.922427Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.922495Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.922609Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.922677Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.922797Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.923006Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.923383Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.923454Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.923566Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.923633Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.923741Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.923808Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.923939Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.924003Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.924115Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.924201Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.924349Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.924522Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.924822Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.925205Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.925606Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.925669Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.925782Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.925848Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.925952Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.926015Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.926124Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.926188Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.926383Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.926457Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.926579Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.926761Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.927245Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.927355Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.927475Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.927540Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.927653Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.927720Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.927828Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.927895Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.928049Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.928124Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.928279Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.928519Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.929062Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.929132Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.929244Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.929304Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.929414Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.929516Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.929633Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.929696Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.929802Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.929866Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.931242Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.931428Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.932067Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.932145Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.932260Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.932338Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.932452Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.932512Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.932668Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.932728Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.932842Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.932908Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.933084Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.933767Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.933909Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.933983Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.934130Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.934210Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.934329Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.934395Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.934515Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.934576Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.951214Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.952026Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.952174Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.952374Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.953481Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.953600Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.953920Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.954040Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.954176Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.954555Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.954802Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.955325Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.955739Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:43.956241Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-01T21:51:43.956474Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.957605Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.958578Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.960245Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.961661Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.967632Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-06-01T21:51:43.969601Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-01T21:51:43.974023Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-01T21:51:43.975580Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-06-01T21:51:43.978715Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-06-01T21:51:43.984313Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-06-01T21:51:43.985584Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-06-01T21:51:43.987957Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-01T21:51:45.003274Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.004251Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.007674Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-01T21:51:45.036727Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.037648Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.041054Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-06-01T21:51:45.152397Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.153433Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.156962Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-01T21:51:45.468673Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.469670Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.473535Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-01T21:51:45.477932Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.478921Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.482547Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-01T21:51:45.944684Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.945670Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.948714Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-06-01T21:51:46.009864Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.010896Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.014277Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-01T21:51:46.125726Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.126791Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.131067Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-01T21:51:46.242434Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.243801Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.247393Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-01T21:51:46.308503Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.309791Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.313717Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-06-01T21:51:46.342698Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.343903Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.348188Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-01T21:51:46.348489Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.349509Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.353237Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-01T21:51:46.414399Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.415559Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.419580Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-01T21:51:46.480884Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.482575Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.486147Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-01T21:51:46.547635Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.548847Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.552993Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-06-01T21:51:46.764475Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.765791Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.770482Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-06-01T21:51:46.831171Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.832306Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.837102Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-06-01T21:51:46.947914Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.949320Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.952819Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-01T21:51:47.014157Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.015388Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.019940Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-01T21:51:47.130735Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.132026Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.136068Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-06-01T21:51:47.164909Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.166078Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.170094Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-06-01T21:51:47.231286Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.232424Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.236492Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-01T21:51:47.397965Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.399305Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.403495Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-01T21:51:47.815528Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.816750Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.821098Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-06-01T21:51:47.881625Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.883262Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.887706Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-01T21:51:48.049196Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.050734Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.054802Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-01T21:51:48.115733Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.118046Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.118824Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.120875Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.124576Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-06-01T21:51:48.125843Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-01T21:51:48.185869Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.187427Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.191273Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-01T21:51:48.252342Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.253975Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.254338Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.257693Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.259824Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-01T21:51:48.260944Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-06-01T21:51:48.322396Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.322489Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.323362Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.323713Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.329180Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-06-01T21:51:48.329450Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-06-01T21:51:48.388604Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.388725Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.389609Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.389996Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.394782Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-01T21:51:48.395808Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-01T21:51:48.456180Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.457248Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.461238Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-01T21:51:48.673261Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.674285Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.678836Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-01T21:51:48.739148Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.740067Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.743889Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-06-01T21:51:49.106415Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.106541Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.107471Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.107869Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.112203Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-01T21:51:49.113391Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-01T21:51:49.173374Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.173495Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.173539Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.174536Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.174920Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.175529Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.180168Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-01T21:51:49.182135Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-01T21:51:49.183327Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-06-01T21:51:49.241035Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.242041Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.245680Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-06-01T21:51:49.307160Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.307256Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.308260Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.308627Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.313043Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-01T21:51:49.314096Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-01T21:51:49.374701Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.375675Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.379428Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-01T21:51:49.384209Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.384976Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.388271Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-01T21:51:49.417193Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.418189Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.421871Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-01T21:51:49.435216Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.436087Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.439654Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-01T21:51:49.468774Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.469698Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.472483Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.473518Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.474008Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-06-01T21:51:49.476509Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-06-01T21:51:49.589416Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.590597Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.595722Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-06-01T21:51:49.655229Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.656091Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.659842Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-01T21:51:49.721442Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.722361Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.726885Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-01T21:51:50.339623Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.340506Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.344722Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-01T21:51:50.405880Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.406863Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.411305Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-01T21:51:50.439605Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.439719Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.440499Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.440984Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.445511Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-01T21:51:50.446032Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-01T21:51:50.556785Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.557617Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.560823Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-06-01T21:51:50.622237Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.623131Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.627224Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-01T21:51:50.939255Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.939395Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.940181Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.942843Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.944260Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-06-01T21:51:50.947002Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-06-01T21:51:51.008418Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.008548Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.009288Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.011429Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.013395Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-06-01T21:51:51.014665Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-06-01T21:51:51.075853Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.075938Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.076564Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.077133Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.081169Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-01T21:51:51.082309Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-01T21:51:51.142097Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.142941Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.146515Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-01T21:51:51.358329Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.359108Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.363087Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-01T21:51:51.424059Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.424848Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.428611Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-06-01T21:51:51.790456Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.791234Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.794689Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-01T21:51:51.855956Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.856076Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.856792Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.857253Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.861915Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-01T21:51:51.863197Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-01T21:51:51.922736Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.922857Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.922891Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.923567Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.924025Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.924579Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.930467Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-01T21:51:51.932670Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-01T21:51:51.934087Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-01T21:51:51.991584Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.991701Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.992955Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.993506Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.994131Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.998078Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.000416Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-01T21:51:52.001371Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-06-01T21:51:52.005048Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-01T21:51:52.064266Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.064604Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.065627Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.066121Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.067080Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.071929Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-01T21:51:52.072795Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.076119Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-01T21:51:52.107722Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-06-01T21:51:52.137586Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.137695Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.137730Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.153834Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.154499Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.157700Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-01T21:51:52.219305Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.384115Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.385039Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.388935Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-01T21:51:52.449856Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.564396Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.565016Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.568709Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-01T21:51:52.597523Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.598330Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.601966Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-06-01T21:51:52.602391Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.667003Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.082658Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.083321Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.086922Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-01T21:51:53.148364Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.148759Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.148977Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.149373Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.150109Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.156898Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-01T21:51:53.157216Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-01T21:51:53.186596Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-01T21:51:53.214804Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.214907Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.214940Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.215253Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.215631Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.219985Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-01T21:51:53.250865Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-01T21:51:53.281068Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.281156Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.281422Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.285502Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-01T21:51:53.346405Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.565226Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-01T21:52:02.796566Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-01T21:52:02.796566Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner]
[2026-06-01T21:52:02.796566Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] workflow version: 2.9.10
[2026-06-01T21:52:02.796663Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner]
[2026-06-01T21:52:02.796673Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-01T21:52:02.796681Z] [nf-6a244f866380d9112366f07421f73d58-fbb1f-699rn] [660_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec