File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/78/dfed50be7c85c9b09d166f2a2481cd/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7_6oamvl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-01 21:56:37,199 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-01 21:56:38,004 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-01 21:56:38,177 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-01 21:56:39,225 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-01 21:56:39,292 - cnv_pipe.batch.run_model - INFO - Processing cluster 808 with 164 probes
2026-06-01 21:56:39,755 - cnv_pipe.batch.run_model.cluster808 - INFO - Child process started for cluster 808 with 164 probes
2026-06-01 21:57:29,516 - cnv_pipe.batch.run_model.cluster808 - INFO - Child process finished cluster 808. Wrote cluster_808_samples.csv and cluster_808_params.csv
2026-06-01 21:57:29,517 - cnv_pipe.batch.run_model - INFO - Cluster 808 finished in 50.23 seconds. Status: SUCCESS