mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d8o69gqr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-01 21:53:49,681 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-01 21:53:50,562 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-01 21:53:50,738 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-01 21:53:51,764 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-01 21:53:51,936 - cnv_pipe.batch.run_model - INFO - Processing cluster 104 with 197 probes
2026-06-01 21:53:52,312 - cnv_pipe.batch.run_model.cluster104 - INFO - Child process started for cluster 104 with 197 probes
2026-06-01 21:54:52,632 - cnv_pipe.batch.run_model.cluster104 - INFO - Child process finished cluster 104. Wrote cluster_104_samples.csv and cluster_104_params.csv
2026-06-01 21:54:52,634 - cnv_pipe.batch.run_model - INFO - Cluster 104 finished in 60.70 seconds. Status: SUCCESS